From: Rapid Leptospira identification by direct sequencing of the diagnostic PCR products in New Caledonia
Name | Sequence | References | Target gene (amplicon size) | Annealing temperature (°C) |
---|---|---|---|---|
lfb1-F | CATTCATGTTTCGAATCATTTCAAA | [15] | lfb1 (331 bp) | 60 |
lfb1-R | GGCCCAAGTTCCTTCTAAAAG | |||
secY-F | ATGCCGATCATTTTTGCTTC | [18] | secY (549 bp) | 60 |
secY-R | AGTTGAGCCCGCAGTTTTC | |||
SecYIVF | GCGATTCAGTTTAATCCTGC | [9] | secY (202 bp) | 54 |
SecYIV | GAGTTAGAGCTCAAATCTAAG | |||
pfkB-F | CCGAAGATAAGGGGCATACC | [20] | pfkB (559 bp) | 52 |
pfkB-R | CAAGCTAAAACCGTGAGTGATT | |||
pntA-F | TGCCGATCCTACAACATTA | pntA (637 bp) | 52 | |
pntA-R | AAGAAGCAAGATCCACAACTAC | |||
sucA-F | AGAAGAGGCCGGTTATCATCAG | sucA (559 bp) | 52 | |
sucA-R | CTTCCGGGTCGTCTCCATTTA | |||
tpiA-F | AAGCCGTTTTCCTAGCACATTC | tpiA (554 bp) | 52 | |
tpiA-R | AGGCGCCTACAAAAAGACCAGA | |||
mreA-F | GTAAAAGCGGCCAACCTAACAC | mreA (601 bp) | 45 | |
mreA-R | ACGATCCCAGACGCAAGTAA | |||
glmU-F | GGAAGGGCACCCGTATGAA | glmU (556 bp) | 50 | |
glmU-R | TCCCTGAGCGTTTTGATTT | |||
fadD-F | AGTATGCGTATCTTCCTCCTT | fadD (576 bp) | 50 | |
fadD-R | TTCCCACTGTAATTTCTCCTAA |