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Table 1 Bacterial strains and plasmids

From: The small regulatory RNA molecule MicA is involved in Salmonella enterica serovar Typhimurium biofilm formation

Strains

Description

Source or reference

Escherichia coli

  

DH5α

F- ϕ80ΔlacZM15 Δ(lacZYAargF) U169 deoP recA1 endA1 hsdR17 (rk- mk-)

Gibco BRL

TOP10F'

F' {lacIq Tn10(TetR)} mcrA Δ(mrr-hsdRMS-mcrBC) ϕ80lacZΔM15 ΔlacX74 deoR recA1 araD139 Δ(ara-leu)7697 galU galK rpsL (StrR) endA1 nupG

Invitrogen

Salmonella enterica serovar Typhimurium

 

SL1344

xyl hisG rpsL; virulent; SmR

[30]

CMPG5602

SL1344 ΔluxS - deletion of the entire luxS CDS

[10]

CMPG5702

SL1344 luxS::KmR

[14]

CMPG5630

SL1344 ΔluxS2 - deletion of the 3' end of luxS CDS

This study

CMPG5628

SL1344 Δhfq

This study

JVS-01028

SL1344 ΔrpoE::CmR

[34]

CMPG5643

SL1344 ΔompA::KmR

Phage lysate of J. Vogel

CMPG5648

SL1344 ΔlamB

This study

Plasmids

  

pJV300

pZE12-luc based plasmid; PLlacO-rrnB terminator; short nonsense transcript; control plasmid; AmpR

[35]

pJV871.14

pZE12-luc based plasmid; LT2 MicA overexpression construct; MicA transcription driven from constitutive PLlacO, starting precisely at G+1; AmpR

[36]

pJV853.1

pZE12-luc based plasmid; LT2 anti-MicA expression construct; anti-MicA transcription driven from constitutive PLlacO; AmpR

J. Vogel,

unpublished data

pKD3

Template for mutant construction; carries

chloramphenicol-resistance cassette; oriRγ origin; AmpR

[31]

pKD46

ParaB-γ-β-exo; temperature-sensitive lambda-red

recombinase expression plasmid; oriR101 origin; AmpR

[31]

pCP20

Temperature-sensitive FLP recombinase

expression plasmid; oriR101 origin; AmpR, CmR

[31]

pFAJ1708

Derivative of RK-2; AmpR; TcR; contains nptII promoter of pUC18-2

[32]

pCMPG5685

pFAJ1708 OmpA complementation construct

This study

pCMPG5687

pFAJ1708 LamB complementation construct

This study

pCMPG5638

pCS26-Pac plasmid carrying a transcriptional reporter fusion between the promoter of the lsrACDBFGE operon and luxCDABE

[10]