Whole-genome sequence analysis of clinically isolated carbapenem resistant Escherichia coli from Iran

BMC Microbiology

Table 3 Genomic and phenotypic characteristics of carbapenem resistant E. coli isolates

Isolate	Clinical sample	Broth dilution MIC (mg/L)			Sequence type	Carbapenemase	ASP^a
		Broth dilution MIC (mg/L)					Susceptible	Resistant
		IMP	COL	TGC			Susceptible	Resistant
CREC-17	urine	32	4	0.12	648	NDM-5, OXA-181	FOS, NIT, TET, DOX, CHL, TGC	GEN, AMK, CIP, COL, IMP
CREC-18	urine	64	0.25	0.25	167	NDM-5	FOS, NIT, GEN, AMK, COL, TGC	CIP, TET, DOX, CHL, IMP
CREC-19	urine	64	0.25	0.25	167	NDM-1	FOS, NIT, CHL, COL, TGC	GEN, AMK, CIP, TET, DOX, IMP
CREC-20	blood	64	0.25	0.25	361	NDM-5	FOS, NIT, AMK, TET, DOX, COL, TGC	GEN, CIP, CHL, IMP

^aAntimicrobial susceptibility profile, determined by disc diffusion and broth dilution methods
IMP Imipenem, TGC Tigecycline, COL Colistin, FOS Fosfomycin, NIT Nitrofurantoin, GEN Gentamicin, AMK Amikacin, CHL Chloramphenicol, TET Tetracycline, DOX Doxycycline, CIP Ciprofloxacin

ISSN: 1471-2180