Table 3 Diversity of the microbiota in the intestinal content samples, determined using sequencing of the 16S rRNA genes

Jejunum

Simpson

0.891

0.840

0.827^y

0.931^x

0.840^y

0.8950

0.9418

0.8356

0.7581

0.9195

0.8434

0.014

0.079

0.011

0.099

Shannon

4.827

5.097

4.360^y

5.798^x

4.728^y

4.678

5.986

4.628

4.043

5.610

4.828

0.120

0.269

 < 0.001

0.347

Chao1

863.69 ⁿ

964.58 ^m

874.56

915.10

952.75

818.28

817.22

955.57

930.84

1012.97

949.94

21.517

0.028

0.366

0.153

Ace

893.12 ⁿ

988.10 ^m

899.43

934.61

987.80

836.87

836.11

1006.39

961.99

1033.11

969.19

21.464

0.038

0.267

0.078

Ileum

Simpson

0.843

0.801

0.835

0.817

0.814

0.7967^abc

0.8881^a

0.8432^ab

0.8732^abc

0.7450^c

0.7855^b

0.012

0.105

0.764

0.005

Shannon

4.761 ^m

4.231 ⁿ

4.406

4.501

4.581

4.180^bc

5.272^a

4.832^ab

4.632^ab

3.730^c

4.330^bc

0.101

0.016

0.778

0.002

Chao1

857.03

859.65

851.08

829.34

894.60

818.51^b

756.24^b

996.36^a

883.65^b

902.44^ab

792.85^b

23.907

0.957

0.546

0.019

Ace

868.57

894.30

856.53

872.74

915.04

824.00^bc

778.70^c

1003.03^a

889.07^abc

966.79^ab

827.06^bc

22.506

0.574

0.546

0.012

Cecum

Simpson

0.927

0.914

0.910

0.946

0.9062

0.8906

0.9616

0.9301

0.9288

0.9305

0.8829

0.008

0.406

0.102

0.079

Shannon

6.349

6.177

6.092

6.582

6.115

5.846

6.832

6.370

6.338

6.332

5.860

0.100

0.396

0.102

0.076

Chao1

1210.19

1159.85

1163.04

1160.62

1231.40

1129.13

1274.10

1227.36

1196.95

1047.15

1235.44

28.084

0.380

0.502

0.114

Ace

1227.36

1169.21

1174.13

1176.00

1244.73

1149.44

1285.99

1246.65

1198.82

1066.01

1242.81

26.570

0.286

0.462

0.130