Functional Group | Taxonomy | Functional Annotation | Reference | ||
---|---|---|---|---|---|
Phylum | Order | Species | |||
Pathogen | Proteobacteria | Enterobacterales | Morganella morganii | Insect pathogen | [57] |
Proteobacteria | Enterobacterales | Serratia marcescens | Insect pathogen | ||
Proteobacteria | Pseudomonadales | Pseudomonas aeruginosa | Insect pathogen | [58] | |
Proteobacteria | Enterobacterales | Serratia spp. (OTU_1130; OTU_3075) | Animal pathogen | ||
Proteobacteria | Acetobacterales | Alcaligenes faecalis | Human pathogen | [60] | |
Proteobacteria | Acetobacterales | Roseomonas spp. (OTU_2563; OTU_3173; OTU_3212) | Human pathogen | [61] | |
Proteobacteria | Burkholderiales | Burkholderia cenocepacia | Human pathogen | [62] | |
Proteobacteria | Coxiellales | Coxiella spp. (OTU_2646; OTU_3289; OTU_3667; OTU_4069) | Human pathogen | [63] | |
Proteobacteria | Enterobacterales | Proteus mirabilis | Human pathogen | ||
Proteobacteria | Xanthomonadales | Stenotrophomonas maltophilia | Human pathogen | [66] | |
Proteobacteria | Xanthomonadales | Stenotrophomonas acidaminiphila | Potential human pathogen | [67] | |
Proteobacteria | Xanthomonadales | Stenotrophomonas spp. (OTU_3295) | Potential human pathogen | [68] | |
Proteobacteria | Pseudomonadales | Acinetobacter lwoffii | Human and fish pathogen | ||
Proteobacteria | Pseudomonadales | Acinetobacter baylyi | Human pathogen | [71] | |
Proteobacteria | Pseudomonadales | Acinetobacter ursingii | Human pathogen | [72] | |
Proteobacteria | Pseudomonadales | Acinetobacter pittii | Human pathogen | [73] | |
Proteobacteria | Pseudomonadales | Acinetobacter spp. (OUT_11; OTU_1250; OTU_2772; OTU_2973; OTU_3124; OTU_3319; OTU_4025) | Human pathogen | [74] | |
Firmicutes | Bacillales | Bacillus anthracis | Human pathogen | [75] | |
Firmicutes | Lactobacillales | Streptococcus anginosus | Human pathogen | [76] | |
Bacteroidota | Bacteroidales | Bacteroides fragilis | Human pathogen | [77] | |
Bacteroidota | Flavobacteriales | Empedobacter brevis | Human pathogen | [78] | |
Bacteroidota | Flavobacteriales | Myroides odoratimimus | Human pathogen | [79] | |
Healthy vaginal bacteria | Firmicutes | Lactobacillales | Lactobacillus crustorum | Healthy vaginal microbiome | |
Firmicutes | Lactobacillales | Lactobacillus reuteri | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus curvatus | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus plantarum | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus ruminis | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus brevis | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus murinus | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus rossiae | Healthy vaginal microbiome | ||
Firmicutes | Lactobacillales | Lactobacillus spp. (OTU_3161; OTU_3392; OTU_4098; OTU_89; OTU_118) | Healthy vaginal microbiome |