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Fig. 4 | BMC Microbiology

Fig. 4

From: Genomic diversity, pathogenicity and antimicrobial resistance of Escherichia coli isolated from poultry in the southern United States

Fig. 4

The neighbor joining phylogenetic tree of the whole genome for the E. coli isolates from southern US poultry. The boxes mark the APEC representative strains reported in public dataset, which are genetically close to the isolates of this study. Data collection, distance calculation, tree construction and visualization were performed as described in Fig. 3. Color bar in the left of the figure shows the phylogroup cluster of the 10 isolates: E5 and E7 and their close APEC O2-211 belong to the phylogroup G; E10 and E1 and their close 9 APEC belong to the phylogroup B2; E3 and its close APEC O78 belong to the phylogroup C; E6 and E9 belong to the phylogroup B1; E2, E4 and E8 and their close APEC O1 belong to the phylogroup A

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