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Table 6 The analysis of biosynthetic pathways in Burkholderia sp. S-53 by antiSMASH 6.0

From: Isolation, complete genome sequencing and in silico genome mining of Burkholderia for secondary metabolites

Cluster serial number

Region

Type*

From

To

Most similar known cluster

#Similarity

1

1.1

transAT-PKS,butyrolactone

142,912

228,926

lactimidomycin/8,9-dihydrolactimidomycin/8-hydr oxy-8,9-dihydrolactidomycin/7-hydroxy-8-desmetho y-isomigrastatin

44%

2

1.2

terpene

355,571

377,625

  

3

1.3

other

742,229

783,314

pyrrolnitrin

100%

4

1.4

RiPP-like

963,741

974,556

  

5

2.1

NRPS

1,804,138

1,858,813

ornibactin

100%

6

2.2

terpene

2,235,266

2,256,099

  

7

2.3

arylpolyene

3,200,509

3,241,720

APE Vf

10%

8

3.1

terpene

44,410

63,612

N-acyloxyacyl glutamine

50%

9

3.2

hserlactone

622,283

642,891

  

10

3.3

NRPS

979,395

1,029,254

pyochelin

100%

11

3.4

terpene

1,728,924

1,753,023

  

12

3.5

siderophore,RRE-containing,RiPP-like

1,777,030

1,809,926

staphylobactin

18%

13

3.6

NRPS-like,betalactone

1,976,594

2,020,151

fragin

87%

14

3.7

RiPP-like

2,375,696

2,386,586

  

15

3.8

phosphonate

3,223,192

3,264,880

  
  1. *NRPS- Non ribosomal peptide synthetase cluster
  2. #The “similarity” is the percent of homologous genes in the query and hit clusters. As defined by antiSMASH, the homologous genes were chosen for their high sequence identity (> 30%) and short BLAST alignments (> 25%)