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Fig. 1 | BMC Microbiology

Fig. 1

From: Distribution, inducibility, and characterisation of prophages in Latilactobacillus sakei

Fig. 1

Prophage genomes with ORFs (represented as arrows) detected by PHASTER [11, 12]. Gene modules colourised after predicted task: Lysogeny (ochre), replication (green), packaging (lilac), head (light blue), tail (dark blue), fiber (yellow), lysis (red), hypothetical proteins (grey), transposase (light yellow) and phage-related proteins with unknown task (white). “*”: First transposase of phage φ-DJ1812 (harboured by strain TMW 1.1398), which is the reason for the failed contig assembly within phage TMW 1.1386 P1 after bacterial genome sequencing. “**”: SNP resulting in an incomplete ORF (compare TMW 1.1386 P1). “***”: Second transposase, which was discussed to be responsible for incomplete phage assembly of φ-DJ1812 [8]. Nucleotide similarity of 65–100% is depicted as blue bars (red if reverse similarity is given)

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