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Table 1 Summary of the specimens with hits to Wolbachia based on Kraken2 and MetaPhlAn2 results

From: One’s trash is someone else’s treasure: sequence read archives from Lepidoptera genomes provide material for genome reconstruction of their endosymbionts

Sample Number

Family

Species

Biosample

SRA Accession

Kraken2 (Number of reads)

MetaPhlAn 2 (Number of reads)

Wolbachia

Phage Wo

1

Adelidae

Adela reaumurella (Linnaeus, 1758)

SAMN08536812

SRR6727426

7705

1111

163,166

2

Depressariidae

Depressaria pastinacellaa (Goeze, 1783)

SAMN08712583

SRR6984048 / SRR6984049 / SRR6984052 / SRR6984053 /SRR6984054

1,794,372

75,297

934,134

3

Erebidae

Hyphantria cunea (Drury, 1773)

SAMN10290292

SRR8109452

5271

243

4

Erebidae

Hyphantria cunea (Drury, 1773)

SAMN10290285

SRR8109455

10,719

395

5

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666979

SRR8386696

14,436

533

42,874

6

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666981

SRR8386698

23,545

822

70,593

7

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666980

SRR8386699

25,589

964

75,737

8

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666976

SRR8386700

26,240

882

74,626

9

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666977

SRR8386701

5676

218

15,557

10

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666974

SRR8386708

15,323

420

42,046

11

Gelechiidae

Keiferia lycopersicella (Walsingham, 1897)

SAMN10666975

SRR8386709

13,604

353

37,698

12

Gelechiidae

Phthorimaea operculella (Zeller, 1873)

SAMN10666968

SRR8386702

58,341

2535

125,480

13

Gelechiidae

Phthorimaea operculella (Zeller, 1873)

SAMN10666969

SRR8386703

42,812

1808

90,756

14

Gelechiidae

Phthorimaea operculella (Zeller, 1873)

SAMN10666970

SRR8386704

47,813

2201

101,751

15

Gelechiidae

Phthorimaea operculella (Zeller, 1873)

SAMN10666971

SRR8386705

47,521

2321

78,887

16

Gelechiidae

Phthorimaea operculella (Zeller, 1873)

SAMN10666972

SRR8386706

42,526

1925

83,015

17

Gelechiidae

Phthorimaea operculella (Zeller, 1873)

SAMN10666967

SRR8386711

37,194

1894

78,586

18

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666962

SRR8386712

20,483

948

56,469

19

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666963

SRR8386713

47,837

2141

133,451

20

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666964

SRR8386714

51,727

2274

146,211

21

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666965

SRR8386715

53,957

2340

156,218

22

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666958

SRR8386716

50,877

2202

145,524

23

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666959

SRR8386717

56,249

2364

160,054

24

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666960

SRR8386718

90,669

3945

263,050

25

Gelechiidae

Tuta absoluta (Meyrick, 1917)

SAMN10666961

SRR8386719

42,398

1860

117,505

26

Geometridae

Operophtera brumataa (Linnaeus, 1758)

SAMN03121611

SRR1618545 / SRR1618582 / SRR1618581

490,973

18,035

1,171,280

27

Gracillariidae

Cameraria ohridella (Deschka & Bimic, 1986)

SAMN07172872

SRR5626452

1289

-

1543

28

Hesperiidae

Udranomia orcinus (Felder & Felder, 1867)

SAMN06232397

SRR7174560

11,407

52

10,690

29

Micropterigidae

Micropterix facetella (Zeller, 1851)

SAMN08536841

SRR6727435

391,265

1745

263,633

30

Noctuidae

Chrysodeixis includens (Walker, 1858)

SAMN06835216

SRR5754050

1287

35

31

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187070

SRR5132392

3605

135

1500

32

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187034

SRR5132393

1663

62

2057

33

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187071

SRR5132396

2401

84

1428

34

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187040

SRR5132402

5285

194

2935

35

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187037

SRR5132403

1849

68

1287

36

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187033

SRR5132404

229,970

1672

803,943

37

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187043

SRR5132409

1773

65

-

38

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187073

SRR5132419

1152

18

-

39

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187030

SRR5132426

1678

54

1322

40

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187076

SRR5132427

2383

79

-

41

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187047

SRR5132432

2271

76

-

42

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187032

SRR5132433

170,164

1114

617,094

43

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187038

SRR5132437

6641

201

2529

44

Noctuidae

Spodoptera litura (Fabricius, 1775)

SAMN06187072

SRR5132442

395

141

1356

45

Nymphalidae

Heliconius erato demophoon (Ménétriés, 1855)

SAMN05224183

SRR4032094

1688

13

1442

46

Nymphalidae

Heliconius erato demophoon (Ménétriés, 1855)

SAMN08278546

SRR6432897

1,259,318

21,957

47

Nymphalidae

Hypolimnas misippus (Linnaeus, 1764)

SAMN10740678

SRR8549338

-

-

1152

48

Nymphalidae

Pararge aegeria (Linnaeus, 1758)

SAMN02688782

SRR1190479

33,302

323

1,261,640

49

Nymphalidae

Pararge aegeria (Linneaus, 1758)

SAMN09760079

SRR7637637

27,561

310

1,033,664

50

Nymphalidae

Pararge aegeria (Linneaus, 1758)

SAMN09760078

SRR7637638

29,222

255

1,245,913

51

Nymphalidae

Polygonia c-album (Linneaus, 1758)

SAMN02688783

SRR1190476

146,109

1682

452,747

52

Papilionidae

Parnassius apollo (Linneaus, 1758)

SAMN08456343

SRR6679361

6463

-

53

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN07626876

SRR6023624

254,213

2402

-

54

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388765

SRR6505268

210,829

2090

661,700

55

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388772

SRR6505269

318,891

2974

1,032,126

56

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388766

SRR6505270

53,109

269

149,256

57

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388767

SRR6505271

26,201

288

62,939

58

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388768

SRR6505272

61,027

327

171,131

59

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388762

SRR6505273

156,370

1532

386,427

60

Plutellidae

Plutella australiana (Landry & Hebert, 2013)

SAMN08388769

SRR6505274

84,147

825

207,246

61

Plutellidae

Plutella Australiana (Landry & Hebert, 2013)

SAMN08388764

SRR6505276

195,426

1155

524,931

62

Plutellidae

Plutella Australiana (Landry & Hebert, 2013)

SAMN08388771

SRR6505279

248,327

1429

870,067

63

Plutellidae

Plutella australiana a (Landry & Hebert, 2013)

SAMN08388770

SRR6505277

238,792

2363

1,146,122

64

Plutellidae

Plutella xylostella (Linneaus, 1758)

SAMN08388733

SRR6505226

-

-

1727

65

Plutellidae

Plutella xylostella (Linneaus, 1758)

SAMN08388732

SRR6505227

2,345,019

9539

-

66

Tineidae

Tineola bisselliella (Hummel, 1823)

SAMN08536677

SRR6727411

1867

46

-

  1. arepresent specimens that had more than one positive SRA accession, for these samples the numbers represented are across all SRA runs