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Table 2 Antimicrobial resistance genes are present in the pEC1390-1 and pEC1390-2 

From: Whole-genome-sequence-based characterization of an NDM-5-producing uropathogenic Escherichia coli EC1390

Plasmid

Antimicrobial resistance genes

Position in plasmid

Identity

Characteristics

pEC1390-1

dfrA17

4344.4812

98.95

trimethoprim-resistant dihydrofolate reductase

aadA5

4942.5728

99.75

AadA family aminoglycoside 3″-O-nucleotidyltransferase

sul1

6273.7110

99.76

sulfonamide-resistant dihydropteroate synthase

blea

11,043.11381

-

bleomycin binding protein Ble-MBL

blaNDM-5

11,408.12218

99.75

NDM family subclass B1 metallo-β-lactamase

mph(A)

13,597.14497

99.78

Mph(A) family macrolide 2’-phosphotransferase

mrx(A)a

14,506.15734

-

macrolide resistance MFS transporter Mrx(A)

blaCTX-M-15

20,707.21579

99.66

CTX-M family class A extended-spectrum β-lactamase

catB3

22,940.23378

99.10

CatB-related O-acetyltransferase

blaOXA-1

23,512.24338

99.52

OXA-1 family class D β-lactamase

aac(6')-Ib-cr

24,467.24985

99.61

fluoroquinolone-acetylating aminoglycoside 6’-N-acetyltransferase AAC(6')-Ib-cr5

tet(A)

28,507..29704

99.67

tetracycline efflux MFS transporter Tet(A)

K7G95_00640a

29,736.30619

-

EamA family transporter

catA1

154,061.154715

99.10

chloramphenicol acetyltransferase

pEC1390-2

blaTEM-1B

60,372..61228

95.54

TEM family class A β-lactamase

rmtB

61,397.62139

98.28

amikacin, gentamicin, tobramycin, kanamycin resistance

  1. aAntimicrobial resistance genes were identified only by using NCBI prokaryotic annotation pipeline but not ResFinder database