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Table 1 Classification of cattle based on the growth, production stages, and their residential management units of the dairy herd where samples were collected

From: Dynamic changes in fecal bacterial microbiota of dairy cattle across the production line

Management Unit

No. of Samples

Unit ID

Description

Hutch calves

9

1

From birth to approximately 1–2 weeks after weaning, individually housed (1 to 70 days age approximately)

Post weaned heifers

6

2

Group-housed heifers and bull calves (if not sold) fed solid diet

Breeding heifers

8

3

Approximately 13 to 15 months old

Springer

8

4

Within 1 to 4 weeks from calving, pregnant nulliparous heifers

Fresh uniparous cows

8

5

1 to 2 months post-calving, first lactation cows

Mid-lactation uniparous cows

8

6

60 to 250 Days in Milk, first lactation

Fresh multiparous cows

8

7

1 to 2 months post-calving, second lactation or greater

Mid-lactation multiparous cows

8

8

60 to 250 Days in Milk, second lactation or greater

Pregnant late

lactation cows

8

9

> 250 Days in Milk

Far-off dry cows

3

10

21 to 60 days prior to calving, multiparous dry cows

Close up dry cows

8

11

within 21 days prior to calving, multiparous dry cows

Hospital pen/

Fresh (post-calving)

8

12

Lactating cows treated with medication that requires milk withdrawal. May include fresh cows (post-calving) during their transition from producing colostrum to milk and/or pending milk withdrawal after treatment at drying (prior to entering Far-off dry pen).