Table 2 Wilcoxon-rank test faeces compared to swab abundance at maximum setting of top 10,000 most abundant organism OTUs, with p < 0.05
From: Standard rectal swabs as a surrogate sample for gut microbiome monitoring in intensive care
OTU | P (rank test) | Adjusted P (Bonferroni) | False discovery rate (FDR) | Faeces mean | Swab mean | Fold Change |
|---|---|---|---|---|---|---|
Finegoldia magna | 0.0002 | 0.08 | 0.08 | 0.01 | 0.16 | -21.21 |
Peptoniphilus | 0.0008 | 0.40 | 0.15 | 0.02 | 0.15 | -8.15 |
Lawsonella clevelandensis | 0.0009 | 0.46 | 0.15 | 0.03 | 0.16 | -4.71 |
Peptoniphilus grossensis | 0.002 | 1 | 0.27 | 0.002 | 0.11 | -48.73 |
Porphyromonas bennonis | 0.004 | 1 | 0.45 | 0.01 | 0.12 | -9.77 |
Levyella massiliensis | 0.006 | 1 | 0.50 | 0.01 | 0.17 | -22.00 |
Prevotella corporis | 0.009 | 1 | 0.69 | 0.01 | 0.15 | -29.33 |
Porphyromonas sp. | 0.02 | 1 | 0.80 | 0.01 | 0.15 | -14.00 |
Mobiluncus curtisii | 0.02 | 1 | 0.80 | 0.01 | 0.11 | -19.90 |
Ileibacterium massiliense | 0.02 | 1 | 0.80 | 0.004 | 0.09 | -24.28 |
Prevotella corporis | 0.02 | 1 | 0.90 | 0.002 | 0.10 | -57.63 |
Varibaculum cambriense | 0.02 | 1 | 0.92 | 0.01 | 0.14 | -9.73 |
Finegoldia magna | 0.03 | 1 | 0.92 | 0.01 | 0.16 | -19.80 |
Actinobacteria unclassified | 0.04 | 1 | 1 | 0.10 | 0.15 | -1.47 |