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Table 2 Strains, plasmids, and primers used in this study

From: A DasA family sugar binding protein Ste2 links nutrient and oxidative stress to exopolysaccharides production in Streptomyces sp. 139

Strains, plasmids, and primers

Description

Reference

Bacterial strains

  

 Streptomyces sp. 139

Ebosin producing strain

Our lab

 Streptomyces sp. 139 D2

ste2 knockout mutant of Streptomyces sp.139

This study

 Streptomyces sp. 139 C2

ste2-complemented strain

This study

 E. coli DH5α

F− recA1 endA1 hsdR17 deoR thi-1 supE44 gyrA96 relA1 Δ(lacZYA- argF) U169λ−(φ80dlacZΔM15)

 

 E. coli ET12567

methylation-deficient E. coli; dam− dcm− hsdM

44

 E. coli BL21 (DE3)

F− ompT hsdSB(rB− mB−) dcm gal λ(DE3)

Novagen

Plasmids

  

 pKC1139

Shuttle plasmid (E.coli–Streptomyces); pSG5, pBR322; aac[3]IV lacZa oriTRK2; Amr

43

 pKC2D

pKC1139 derived plasmid carrying F1, F2 and Kmr fragments; Kmr Amr

This study

 pKC2C

pKC1139 derived plasmid carrying 0.45-kb ErmE* promoter fragment and ste2; Amr

This study

 pGEM-3Zf-ErmE*

Resource of ErmE* promoter; Apr

45

 pET30a

T7 promoter, His-tag; Kmr

Novagen

 pET30a-ste2

pET30a derived plasmid carrying ste2; Kmr

This study

Primers

  

 P1 (EcoRI)

CTGGAATTCGTGCCCTTGCCCTGGAT

F1

 P2 (XbaI)

GCCTCTAGACTTCGCCTTGGTCTTCT

F1

 P3 (XbaI)

GCATCTAGAGGCAGCCAGAAGCAGGAAC

F2

 P4 (HindIII)

AGCAAGCTTACAGGATGGAGCGGAGG

F2

 P5 (BamHI)

CGCGGATCCATGGGTGCGCAAGGCATT

ste2

 P6 (HindIII)

CCCAAGCTTTTACTGCTGCTGCGCCAG

ste2

 ste5 forward

GCTGATCCTGCTGGTGGTGC

 

 ste5 reverse

CCATCGTGCGGAACTTGAGG

 

 ste8 forward

CTCGGCAAGCTCAGCCAGAC

 

 ste8 reverse

CGAGCAGCAGGAACAGCACC

 

 ste17 forward

CTGGACGGCGACGAGAT

 

 ste17 reverse

CGACGCAGTGGAACGAG

 

 hrdB forward

TGGTCGAGGTCATCAACAAG

 

 hrdB reverse

TGGACCTCGATGACCTTCTC

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