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Table 1 Taxonomy, ST, isolate source, country of origin and resistance genes of the isolates

From: Taxonomic position, antibiotic resistance and virulence factor production by Stenotrophomonas isolates from patients with cystic fibrosis and other chronic respiratory infections

Order nr

ANIb

ST

Isolate source

Country

Resistance genes

543,227

A

89

CF

Northern Ireland

533,506

A

215

CF

the Netherlands

534,845

A

549

CF

Spain

534,836

B

130

CF

Spain

546,334

C

133

other

Northern Ireland

543,210

D

536

CF

Northern Ireland

533,529

D

337

CF

the Netherlands

534,834

D

337

CF

Spain

533,533

E

39

CF

the Netherlands

534,812

E

39

CF

Spain

534,818

E

39

CF

Spain

aac(6′)-Iz

542,535

E

39

CF

Northern Ireland

543,206

E

39

CF

Northern Ireland

543,208

E

39

CF

Northern Ireland

543,215

E

39

CF

Northern Ireland

543,217

E

39

CF

Northern Ireland

546,336

E

39

other

Northern Ireland

543,216

E

180

CF

Northern Ireland

542,523

F

535

CF

Northern Ireland

 

542,525

F

535

CF

Northern Ireland

 

542,527

F

535

CF

Northern Ireland

 

542,530

F

535

CF

Northern Ireland

 

543,225

F

535

CF

Northern Ireland

 

547,141

F

535

CF

Northern Ireland

 

548,978

F

535

other

Northern Ireland

 

534,846

G

537

CF

Spain

543,222

H

79

CF

Northern Ireland

533,514

H

545

CF

the Netherlands

548,948

I

34

other

the Netherlands

534,842

J

548

CF

Spain

533,515

K

29

CF

the Netherlands

533,513

K

77

CF

the Netherlands

543,213

K

77

CF

Northern Ireland

548,945

K

219

other

Northern Ireland

533,531

K

224

CF

the Netherlands

534,799

K

538

CF

Spain

534,811

L

15

CF

Spain

542,542

L

15

CF

Northern Ireland

534,821

M

533

CF

Spain

aac(6′)-Ib3, ant(2″)-Ia, aac(6′)-Ib-cr

534,822

M

534

CF

Spain

aac(6′)-Ib3, ant(2″)-Ia, aac(6′)-Ib-cr

533,501

S. maltophilia

4

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,507

S. maltophilia

4

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,524

S. maltophilia

4

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,532

S. maltophilia

4

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,534

S. maltophilia

4

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

534,831

S. maltophilia

4

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,838

S. maltophilia

4

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

542,522

S. maltophilia

4

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

548,946

S. maltophilia

4

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

533,502

S. maltophilia

5

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz, aph(3″)-Ib, aph(6)-Id

533,518

S. maltophilia

5

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

534,802

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,804

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz, aph(6)-Id, aph(4)-Ia, aac(6′)-Ib-cr, aph(3″)-Ib, aac(3)-IV, aph(3′)-Ia, aac(6′)-Ib-Hangzhou, tet(G), sul1, cmx

534,807

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,823

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,825

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,829

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,839

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,843

S. maltophilia

5

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

540,831

S. maltophilia

5

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz, aph(6)-Id, aac(6′)-Ib-cr, aph(3″)-Ib, aac(6′)-Ib3, ant(2″)-Ia, sul1

542,536

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

542,538

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

542,539

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

543,203

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

543,219

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

546,340

S. maltophilia

5

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

546,343

S. maltophilia

5

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

547,144

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

547,147

S. maltophilia

5

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz, aph(3″)-Ib, aph(6)-Id

548,947

S. maltophilia

5

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,517

S. maltophilia

8

CF

the Netherlands

aph(3′)-IIc

534,844

S. maltophilia

26

CF

Spain

aph(3′)-IIc

542,532

S. maltophilia

26

CF

Northern Ireland

aph(3′)-IIc

542,534

S. maltophilia

26

CF

Northern Ireland

aph(3′)-IIc

543,223

S. maltophilia

26

CF

Northern Ireland

aph(3′)-IIc

533,525

S. maltophilia

27

CF

the Netherlands

aph(3′)-IIc

533,509

S. maltophilia

31

CF

the Netherlands

aph(3′)-IIc

533,530

S. maltophilia

31

CF

the Netherlands

aph(3′)-IIc

546,338

S. maltophilia

31

CF

Northern Ireland

aph(3′)-IIc

534,806

S. maltophilia

84

CF

Spain

aph(3′)-Iic, aac(3)-IV, aph(3″)-Ib, aph(6)-Id, aph(4)-Ia, drfA15, tet(A), sul1

534,817

S. maltophilia

92

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,840

S. maltophilia

146

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,835

S. maltophilia

162

CF

Spain

aph(3′)-IIc

543,221

S. maltophilia

162

CF

Northern Ireland

aph(3′)-IIc

546,339

S. maltophilia

162

CF

the Netherlands

aph(3′)-IIc

547,143

S. maltophilia

162

CF

Northern Ireland

aph(3′)-IIc

548,949

S. maltophilia

162

CF

the Netherlands

aph(3′)-IIc

548,950

S. maltophilia

199

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,512

S. maltophilia

246

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

534,832

S. maltophilia

246

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

543,220

S. maltophilia

531

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

534,809

S. maltophilia

532

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

533,510

S. maltophilia

539

CF

the Netherlands

aph(3′)-IIc

533,527

S. maltophilia

540

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

533,528

S. maltophilia

541

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

539,959

S. maltophilia

541

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

534,828

S. maltophilia

542

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,808

S. maltophilia

543

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

534,801

S. maltophilia

544

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

543,211

S. maltophilia

546

CF

Northern Ireland

aph(3′)-IIc

534,805

S. maltophilia

547

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

546,337

S. maltophilia

550

CF

Northern Ireland

aph(3′)-IIc, aac(6′)-Iz

546,342

S. maltophilia

551

CF

the Netherlands

aph(3′)-IIc, aac(6′)-Iz

547,148

S. maltophilia

539

other

Northern Ireland

aph(3′)-IIc

534,819

S. maltophilia

xxa

CF

Spain

aph(3′)-IIc, aac(6′)-Iz

547,145

S. pavanii

23

other

Northern Ireland

aac(6′)-Iak

534,815

S. pavanii

24

CF

Spain

aac(6′)-Iak

545,270

S. pavanii

220

other

USA

aac(6′)-Iak

534,800

S. pavanii

233

CF

Spain

aac(6′)-Iak

542,603

S. pavanii

233

CF

Australia

aac(6′)-Iak

533,516

S. pavanii

306

CF

the Netherlands

aac(6′)-Iak

  1. axx no ST available because allele mutM is partially deleted
  2. Taxonomy, ST, isolate source, country of origin and resistance genes of the isolates used in this study