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Table 1 Taxonomy, ST, isolate source, country of origin and resistance genes of the isolates

From: Taxonomic position, antibiotic resistance and virulence factor production by Stenotrophomonas isolates from patients with cystic fibrosis and other chronic respiratory infections

Order nr ANIb ST Isolate source Country Resistance genes
543,227 A 89 CF Northern Ireland
533,506 A 215 CF the Netherlands
534,845 A 549 CF Spain
534,836 B 130 CF Spain
546,334 C 133 other Northern Ireland
543,210 D 536 CF Northern Ireland
533,529 D 337 CF the Netherlands
534,834 D 337 CF Spain
533,533 E 39 CF the Netherlands
534,812 E 39 CF Spain
534,818 E 39 CF Spain aac(6′)-Iz
542,535 E 39 CF Northern Ireland
543,206 E 39 CF Northern Ireland
543,208 E 39 CF Northern Ireland
543,215 E 39 CF Northern Ireland
543,217 E 39 CF Northern Ireland
546,336 E 39 other Northern Ireland
543,216 E 180 CF Northern Ireland
542,523 F 535 CF Northern Ireland  
542,525 F 535 CF Northern Ireland  
542,527 F 535 CF Northern Ireland  
542,530 F 535 CF Northern Ireland  
543,225 F 535 CF Northern Ireland  
547,141 F 535 CF Northern Ireland  
548,978 F 535 other Northern Ireland  
534,846 G 537 CF Spain
543,222 H 79 CF Northern Ireland
533,514 H 545 CF the Netherlands
548,948 I 34 other the Netherlands
534,842 J 548 CF Spain
533,515 K 29 CF the Netherlands
533,513 K 77 CF the Netherlands
543,213 K 77 CF Northern Ireland
548,945 K 219 other Northern Ireland
533,531 K 224 CF the Netherlands
534,799 K 538 CF Spain
534,811 L 15 CF Spain
542,542 L 15 CF Northern Ireland
534,821 M 533 CF Spain aac(6′)-Ib3, ant(2″)-Ia, aac(6′)-Ib-cr
534,822 M 534 CF Spain aac(6′)-Ib3, ant(2″)-Ia, aac(6′)-Ib-cr
533,501 S. maltophilia 4 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,507 S. maltophilia 4 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,524 S. maltophilia 4 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,532 S. maltophilia 4 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,534 S. maltophilia 4 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
534,831 S. maltophilia 4 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,838 S. maltophilia 4 CF Spain aph(3′)-IIc, aac(6′)-Iz
542,522 S. maltophilia 4 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
548,946 S. maltophilia 4 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
533,502 S. maltophilia 5 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz, aph(3″)-Ib, aph(6)-Id
533,518 S. maltophilia 5 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
534,802 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,804 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz, aph(6)-Id, aph(4)-Ia, aac(6′)-Ib-cr, aph(3″)-Ib, aac(3)-IV, aph(3′)-Ia, aac(6′)-Ib-Hangzhou, tet(G), sul1, cmx
534,807 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,823 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,825 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,829 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,839 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,843 S. maltophilia 5 CF Spain aph(3′)-IIc, aac(6′)-Iz
540,831 S. maltophilia 5 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz, aph(6)-Id, aac(6′)-Ib-cr, aph(3″)-Ib, aac(6′)-Ib3, ant(2″)-Ia, sul1
542,536 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
542,538 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
542,539 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
543,203 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
543,219 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
546,340 S. maltophilia 5 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
546,343 S. maltophilia 5 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
547,144 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
547,147 S. maltophilia 5 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz, aph(3″)-Ib, aph(6)-Id
548,947 S. maltophilia 5 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,517 S. maltophilia 8 CF the Netherlands aph(3′)-IIc
534,844 S. maltophilia 26 CF Spain aph(3′)-IIc
542,532 S. maltophilia 26 CF Northern Ireland aph(3′)-IIc
542,534 S. maltophilia 26 CF Northern Ireland aph(3′)-IIc
543,223 S. maltophilia 26 CF Northern Ireland aph(3′)-IIc
533,525 S. maltophilia 27 CF the Netherlands aph(3′)-IIc
533,509 S. maltophilia 31 CF the Netherlands aph(3′)-IIc
533,530 S. maltophilia 31 CF the Netherlands aph(3′)-IIc
546,338 S. maltophilia 31 CF Northern Ireland aph(3′)-IIc
534,806 S. maltophilia 84 CF Spain aph(3′)-Iic, aac(3)-IV, aph(3″)-Ib, aph(6)-Id, aph(4)-Ia, drfA15, tet(A), sul1
534,817 S. maltophilia 92 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,840 S. maltophilia 146 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,835 S. maltophilia 162 CF Spain aph(3′)-IIc
543,221 S. maltophilia 162 CF Northern Ireland aph(3′)-IIc
546,339 S. maltophilia 162 CF the Netherlands aph(3′)-IIc
547,143 S. maltophilia 162 CF Northern Ireland aph(3′)-IIc
548,949 S. maltophilia 162 CF the Netherlands aph(3′)-IIc
548,950 S. maltophilia 199 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,512 S. maltophilia 246 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
534,832 S. maltophilia 246 CF Spain aph(3′)-IIc, aac(6′)-Iz
543,220 S. maltophilia 531 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
534,809 S. maltophilia 532 CF Spain aph(3′)-IIc, aac(6′)-Iz
533,510 S. maltophilia 539 CF the Netherlands aph(3′)-IIc
533,527 S. maltophilia 540 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
533,528 S. maltophilia 541 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
539,959 S. maltophilia 541 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
534,828 S. maltophilia 542 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,808 S. maltophilia 543 CF Spain aph(3′)-IIc, aac(6′)-Iz
534,801 S. maltophilia 544 CF Spain aph(3′)-IIc, aac(6′)-Iz
543,211 S. maltophilia 546 CF Northern Ireland aph(3′)-IIc
534,805 S. maltophilia 547 CF Spain aph(3′)-IIc, aac(6′)-Iz
546,337 S. maltophilia 550 CF Northern Ireland aph(3′)-IIc, aac(6′)-Iz
546,342 S. maltophilia 551 CF the Netherlands aph(3′)-IIc, aac(6′)-Iz
547,148 S. maltophilia 539 other Northern Ireland aph(3′)-IIc
534,819 S. maltophilia xxa CF Spain aph(3′)-IIc, aac(6′)-Iz
547,145 S. pavanii 23 other Northern Ireland aac(6′)-Iak
534,815 S. pavanii 24 CF Spain aac(6′)-Iak
545,270 S. pavanii 220 other USA aac(6′)-Iak
534,800 S. pavanii 233 CF Spain aac(6′)-Iak
542,603 S. pavanii 233 CF Australia aac(6′)-Iak
533,516 S. pavanii 306 CF the Netherlands aac(6′)-Iak
  1. axx no ST available because allele mutM is partially deleted
  2. Taxonomy, ST, isolate source, country of origin and resistance genes of the isolates used in this study