Primer | Sequence (5’ to 3’) a |
---|---|
lolB gene (mutant construction, confirmation and complementation) | |
 lolBF/lolBR | GGATCCAAATCGCCGCGCACGTGGGT/GAATTCAGGGCGAGAGCGTCCATTGG |
Extracellular enzyme encoding genes (promoter analysis and RT-qPCR) | |
 engA gene | |
  844pstF/1002xbaR | AACTGCAGCCTGCGGACAGCGCGCAGGGGG/GCTCTAGAGCTCGACACCCGAGCGCGGTAA |
  engAF/engAR | GTGTGAACGTGTTCGGCTTC/TCATGTCCTTCCAGTTGCGT |
 manA gene | |
  61pstF/420xbaR | CTGCAGTTGGCCGCGCATGCGA /TCTAGAACA AGGTGG ACGCCGCAGAC |
  manAF/manAR | AGTTCTACATGCGCGACAAC/CGTACATGTGCACGCTGAAA |
 prt1 gene | |
  200pstF/512xbaR | AACTGCAGTGTCGCTGCGCCAGGAGCTGAC/GCTCTAGACGGATCGCCCCTGTTATCGATC |
  prt1F/prt1R | CACCGCACAGACCCATCAGA/TTACCAGTTCCGGCCCCAAC |
Stress tolerance related genes (promoter analysis and RT-qPCR) | |
 clpP gene | |
  1315XhoI/1689XbaI | CTCGAGGGGTTCATGGACGCCGCT/TCTAGATGTTGTGGCAGCGGCCTGTG |
  clpPF/clpPR | AGATCCTGACCTTGCGTTCG/CTTGAAGTTGTCGCGTTCGG |
 clpX gene | |
  114xhoF/440xbaR | CTCGAGGCGACCGATATCGACATCCA/TCTAGACCCAGTTACCCCACCCGATG |
  clpXF/ clpXR | CTCGAGGAACTCGATGAGCC/AGCTCCACGCTTTCCATCTC |
Putative lipoprotein encoding genes (RT-qPCR) | |
 0253F/0253R | GCAATTACCAGCTGCGCTAC/TTGGTGACATCCTCGAACGG |
 0677F/0677R | GGCGACTTCAATTGCTACCG/GCACCAGTTTCCATAACGCC |
 0679F/0679R | GCCGATTTCAACAAGGCCAA/TTCGTCGTTGGGAAAGGTCT |
 0707F/0707 R | GGGTCATCGACCTGAGCTAC/CGCGTACCTCGACATTACCG |
 1519F/1519R | GCCTACGTGTGGAACGAACA/CGGTCATGGTCGAACTGCAT |
 1584F/1584R | CGACAGACGCTGTACGAAGA/TATTGACGCGTGCAAAGTGC |
 3831F/3831R | TGAAGATCCACTGGGCCGTA/TTCGGGTTTCTGCTCGGTC |
 4152F/4152R | CGCAATGTGCCATTGGTGAT/CTCCGTGGTATCGAACAGGC |
16S rRNA gene (RT-qPCR) | |
  16SF/16SR | GTAAAGCGTGCGTAGGTGGT/CGTGCCTCAGTGTCAGTGT |