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Table 3 Top 10 features using a combination of Meta and OTUs for classifying DI, SIBO, LI, and CD

From: Determine independent gut microbiota-diseases association by eliminating the effects of human lifestyle factors

 

DI (Meta-OTUoc)

SIBO (Meta-OTUab)

LI (Meta-OTUoc)

CD (Meta-OTUab)

1

BMI

MILK_CHEESE_FREQUENCY

MILK_SUBSTITUTE_FREQUENCY

AGE_CORRECTED

2

AGE_CORRECTED

PROBIOTIC_FREQUENCY

MILK_CHEESE_FREQUENCY

WEIGHT_KG

3

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_

WHOLE_GRAIN_FREQUENCY

FROZEN_DESSERT_FREQUENCY

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_;s_

4

WEIGHT_KG

FROZEN_DESSERT_FREQUENCY

POULTRY_FREQUENCY

p_Bacteroidetes;c_Bacteroidia;o_Bacteroidales;f_[Barnesiellaceae];g_;s_

5

p_Proteobacteria;c_Deltaproteobacteria;o_Desulfovibrionales;f_Desulfovibrionaceae;g_Desulfovibrio;s_

WEIGHT_KG

Caucasian

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_Coprococcus;s_

6

p_Actinobacteria;c_Coriobacteriia;o_Coriobacteriales;f_Coriobacteriaceae;g_;s_

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_[Ruminococcus];s_

ELEVATION

HEIGHT_CM

7

p_Proteobacteria;c_Deltaproteobacteria;o_Desulfovibrionales;f_Desulfovibrionaceae;g_Bilophila;s_

p_Actinobacteria;c_Coriobacteriia;o_Coriobacteriales;f_Coriobacteriaceae;g_Collinsella;s_aerofaciens

HIGH_FAT_RED_MEAT_FREQUENCY

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_Ruminococcus;s_

8

p_Proteobacteria;c_Gammaproteobacteria;o_Enterobacteriales;f_Enterobacteriaceae;g_;s_

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_Oscillospira;s_

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_;s_

9

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_;s_

p_Firmicutes;c_Bacilli;o_Lactobacillales;f_Streptococcaceae;g_Streptococcus;s_

BMI

p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_

10

p_Proteobacteria;c_Gammaproteobacteria;o_Pseudomonadales;f_Pseudomonadaceae;g_;s_

VITAMIN_B_SUPPLEMENT_FREQUENCY

RED_MEAT_FREQUENCY

p_Firmicutes;c_Clostridia;o_Clostridiales;f_;g_;s_