Table 1 Top 10 most important features using three types of feature sets for IBD
Meta | Meta-OTUab | Meta-OTUoc | |||
|---|---|---|---|---|---|
Feature Name | Rank | Feature Name | Rank | Feature Name | Rank |
ELEVATION | 5 | PROBIOTIC_FREQUENCY | 3.7 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_ | 5 |
VITAMIN_B_SUPPLEMENT_FREQUENCY | 6 | p_Firmicutes;c_Erysipelotrichi;o_Erysipelotrichales;f_Erysipelotrichaceae;g_Holdemania;s_ | 4.7 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_Ruminococcus;s_ | 14 |
PROBIOTIC_FREQUENCY | 6.3 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_ | 9.8 | PROBIOTIC_FREQUENCY | 15.6 |
LATITUDE | 7.3 | p_Bacteroidetes;c_Bacteroidia;o_Bacteroidales;f_Rikenellaceae;g_Alistipes;s_indistinctus | 13.4 | EXERCISE_FREQUENCY | 24.7 |
SALTED_SNACKS_FREQUENCY | 7.7 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_Coprococcus;s_ | 14.5 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_;s_ | 25.3 |
AGE_CORRECTED | 7.7 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_Ruminococcus;s_ | 21 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_;g_;s_ | 45.4 |
BMI | 7.9 | p_Proteobacteria;c_Gammaproteobacteria;o_Enterobacteriales;f_Enterobacteriaceae;g_Morganella;s_ | 22.3 | WEIGHT_KG | 48.5 |
MILK_CHEESE_FREQUENCY | 8.1 | VITAMIN_D_SUPPLEMENT_FREQUENCY | 23.3 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_ | 50.7 |
FROZEN_DESSERT_FREQUENCY | 9.7 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_[Ruminococcus];s_ | 29.1 | Caucasian | 51.2 |
VITAMIN_D_SUPPLEMENT_FREQUENCY | 9.7 | VITAMIN_B_SUPPLEMENT_FREQUENCY | 31.3 | p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_;s_ | 51.3 |