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Table 2 Test performance of multiplex polymerase chain reaction (M-PCR) in detection of Streptococcus pneumoniae and Haemophilus influenzae compared to culture method

From: Multiplex polymerase chain reaction detection of Streptococcus pneumoniae and Haemophilus influenzae and their antibiotic resistance in patients with community-acquired pneumonia from southwest Iran

 

Culture for Streptococcus pneumoniae

Culture for Haemophilus influenzae

Positive

Negative

Total

Positive

Negative

Total

PCR Positive

15 (16.3%)

18 (19.5%)

33 (35.8%)

7 (7.6%)

4 (4.3%)

11 (11.9%)

PCR Negative

0 (0.0%)

59 (64.2%)

59 (64.2%)

0 (0.0%)

81 (88.1%)

81 (88.1%)

Total

15 (16.3%)

77 (83.7%)

92 (100%)

7 (7.6%)

85 (92.4%)

92 (100%)

Sensitivity (%)

(95% CI)

100.0% (89.4 to 100.0%)

100.0% (71.5 to 100.0%)

Specificity (%)

(95% CI)

76.6% (65.6 to 85.5%)

95.3% (88.4 to 98.7%)

Positive predictive value (%)

(95% CI)

64.7% (55.0 to 73.3%)

73.3% (51.4 to 87.7%)

Negative predictive value (%)

(95% CI)

100.0%

100.0%

Positive likelihood ratio (%)

(95% CI)

4.3% (2.9 to 6.4%)

21.3% (8.2 to 55.3%)

Negative likelihood ratio (%)

(95% CI)

0.0%

0.0%

Test accuracy (%)

(95% CI)

83.6% (75.4 to 90.0%)

95.8% (89.7 to 98.9%)