Table 2 Analysis of sequenced data of the amplicon metagenomes of the sunflower soil samples
Sampling site | SHR | SHB | ITR | ITB |
|---|---|---|---|---|
Uploading Information | ||||
bp count | 36,938,758 | 25,321,399 | 27,104,520 | 26,066,428 |
Sequences count | 125,264.5 | 86,929.5 | 91,939.5 | 88,384.5 |
Mean sequence length (bp) | 295 ± 5.0 | 289.5 ± 29.0 | 295 ± 5.0 | 295 ± 5.0 |
Mean GC count (%) | 55 ± 3.0 | 53.5 ± 3.0 | 56.5 ± 3.0 | 57 ± 3.0 |
Post QC Information | ||||
bp count | 4,181,225 | 2,912,336.5 | 4,260,016 | 4,645,809 |
Sequences count | 14,556 | 10,364 | 14,637.5 | 15,941 |
Mean sequence length (bp) | 287.5 ± 24.0 | 279 ± 40.0 | 291 ± 9.0 | 291 ± 10.0 |
Mean GC count (%) | 56 ± 4.0 | 54.5 ± 4.0 | 56.5 ± 4.0 | 57 ± 4.0 |
Processed Sequences | ||||
Predicted proteins features | 155.5 | 193.0 | 254.5 | 344.0 |
Predicted rRNA features | 22,730 | 13,358.5 | 22,051 | 25,648 |
Aligned Sequences | ||||
Identified protein features | 60 | 60.5 | 98.5 | 125.5 |
Identified rRNA features | 19,312.5 | 11,693.5 | 18,265 | 20,065 |