Skip to main content

Table 1 Summary of microbial communities across multiple Rabbit body sites at different phylogenetic level

From: Rabbit microbiota across the whole body revealed by 16S rRNA gene amplicon sequencing

Group Body site Phyla number Class number Order number Family number Genus number ASV number
Lin   15 21 38 62 130 2187
  Rectum 15 21 37 59 118 1721
  Cecum 15 20 36 57 116 1662
  Cecal appendix 15 21 37 59 122 1818
  Colon 15 21 37 57 115 1699
SSin   18 24 61 101 170 2049
  Jejunum 16 20 46 62 83 886
  Ileum 16 22 49 78 133 1417
  Duodenum 15 19 42 58 69 810
  Stomach 14 20 47 76 119 893
SML   22 31 62 114 191 804
  Skin 19 24 53 89 154 490
  Mouth 10 16 30 47 64 165
  Lung 19 27 51 81 119 396
Uter   16 20 45 70 93 332
  Uterus 16 20 45 70 93 332
In total   23 37 74 140 264 3148
  1. Note: 1, the number indicates the total number of micbrobial communities in each body site or each group