Table 2 General genome characteristics
From: Genomic convergence between Akkermansia muciniphila in different mammalian hosts
Strain | Coverage | Contigs | Genome size (Mbp) | GC content (%) | Total gene count | Comparison with A. muciniphila MucT | ||
|---|---|---|---|---|---|---|---|---|
ANI (%) | BLAST similarity (> 5 kb) (%) | SNP | ||||||
Chimpanzee 1 | 222 | 77 | 2.6 | 55.7 | 2233 | 99.98 | 99.99 | 0 |
Chimpanzee 2_1 | 150 | 185 | 2.9 | 55.9 | 2629 | 93.87 | 94.39 | 82 |
Chimpanzee 2_2 | 208 | 120 | 2.9 | 55.2 | 2524 | 97.38 | 97.83 | 124,644 |
Siamang | 212 | 110 | 2.7 | 55.8 | 2291 | 99.94 | 99.99 | 53,418 |
Mouse 1 | 179 | 215 | 2.9 | 55.8 | 2585 | 93.85 | 93.49 | 128,793 |
Mouse 2 | 120 | 25 | 2.7 | 55.5 | 2330 | 99.85 | 98.91 | 25,020 |
Pig | 185 | 70 | 2.8 | 55.8 | 2384 | 99.98 | 99.99 | 8 |
Reindeer | 127 | 104 | 2.7 | 55.7 | 2303 | 99.94 | 99.99 | 14 |
Horse | 271 | 90 | 2.8 | 55.7 | 2369 | 99.95 | 99.99 | 13 |
Elephant | 193 | 188 | 2.7 | 55.7 | 2361 | 99.99 | 99.99 | 15 |