Table 1 GI tract obtained Verrucomicrobia sequences of clades 1–12 corresponding to Fig. 1
From: Genomic convergence between Akkermansia muciniphila in different mammalian hosts
Clade | Total amount of sequences in clade | Taxonomy | Host | Similarity (%) to MucT lower limit | Similarity (%) to MucT upper limit | Amount representative sequences |
|---|---|---|---|---|---|---|
1 | 1352 | Genus: Akkermansia | Human (786), other primates (89), Proboscidea (17), Carnivora (4), Sirenia (2), Cingulata (2), rodentia (440), Artiodactyla (6), Perissodactyla (3) and Galliformes (3) | 91.91 | 100 | 15 |
2 | 277 | Genus: Akkermansia | Human (111), Rodentia (165) and Sirenia (1). | 95.66 | 99.09 | 10 |
3 | 4 | Genus: Akkermansia | Primates (4) | 98.30 | 98.84 | 4 |
4 | 57 | Genus: Akkermansia | Human (57) | 94.18 | 98.41 | 5 |
5 | 201 | Genus: Akkermansia | Proboscidea (1), Artiodactyla (142), Diprotodontia (30), Rodentia (3), Perissodactyla (24) and Chiroptera (1) | 85.15 | 90.69 | 17 |
6 | 20 | Genus: Akkermansia | Rodentia (19) and Proboscidea (1) | 86.25 | 89.22 | 4 |
7 | 12 | Genus: Akkermansia | Fish gut sequences (12) | 89.41 | 90.22 | 3 |
8 | 5 | Genus: Akkermansia | Squamata (4) and Sirenia (1) | 94.03 | 94.11 | 2 |
9 | 7 | Genus: Akkermansia | Invertebrates (7) | 92.74 | 93.06 | 2 |
10 | 45 | Order: Chtoniobacterales, Methylacidiphales and Verrucomicrobiales | Human (UC patients) (2), moth larvae (1), earthworm (37), termite (1), grass carp (2) and ascidian (2). | 82.12 | 86.52 | 7 |
11 | 63 | Order: Verrucomicrobiales | earthworm (24), ascidian sea squirt (29), sea cucumber (1), sea horse (1), olive flounder (1), small abalone (2), brown surgeonfish (1), black surgeonfish (1) and grass carp (1), squat lobster (2) | 83.37 | 87.20 | 8 |
12 | 89 | Order: Opitutales | Termites (11), ants (6), black millipede (1), cockroaches (2), ascidian (43), olive flounder (1), royal panaque (1), flying fox (2), baboon (2), eastern black and white colobus (12), Sumatran orang-utan (3), red kangaroo (3), capybara (1) and European rabbit (1). | 77.95 | 82.35 | 10 |