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Table 1 The key parameters of the 15 metabolic models used in this study

From: Global connectivity in genome-scale metabolic networks revealed by comprehensive FBA-based pathway analysis

Model_ID

Organism

Domain1

Metabolites

Reactions

Genes

iHN637 [29]

Clostridium ljungdahlii DSM 13,528

p

698

785

637

iML1515 [21]

Escherichia coli str. K-12 substr. MG1655

p

1877

2712

1516

iAF987 [30]

Geobacter metallireducens GS-15

p

1109

1285

987

iYL1228 [31]

Klebsiella pneumoniae subsp. pneumoniae MGH 78,578

p

1658

2262

1229

iAF692 [32]

Methanosarcina barkeri str. Fusaro

p

628

690

692

iAM_Pb448 [33]

Plasmodium berghei

e

903

1067

448

iAM_Pc455 [33]

Plasmodium cynomolgi strain B

e

907

1074

455

iAM_Pf480 [33]

Plasmodium falciparum 3D7

e

909

1083

480

iAM_Pk459 [33]

Plasmodium knowlesi strain H

e

909

1079

459

iJN1463 [34]

Pseudomonas putida KT2440

p

2153

2927

1462

iSbBS512_1146 [35]

Shigella boydii CDC 3083-94

p

1910

2591

1147

iSDY_1059 [35]

Shigella dysenteriae Sd197

p

1888

2539

1059

iSF_1195 [35]

Shigella flexneri 2a str. 301

p

1917

2630

1195

iSSON_1240 [35]

Shigella sonnei Ss046

p

1936

2693

1240

iPC815 [36]

Yersinia pestis CO92

p

1552

1961

815

  1. Notes: 1. p: prokaryote; e: eukaryote