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Fig. 1 | BMC Microbiology

Fig. 1

From: Molecular signatures of Janthinobacterium lividum from Trinidad support high potential for crude oil metabolism

Fig. 1

Molecular phylogenetic analysis by Maximum Likelihood method 16S rRNA. The evolutionary history was inferred by using the ML method based on the Jukes-Cantor model. The tree with the highest log likelihood (0.0000) is shown. The percentage of trees in which the associated taxa clustered together is shown next to the branches. Initial tree(s) for the heuristic search were obtained by applying the Neighbor-Joining method to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach. A discrete Gamma distribution was used to model evolutionary rate differences among sites (6 categories (+G, parameter = 0.4823)). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 106 nucleotide sequences. All positions containing gaps and missing data were eliminated. There were a total of 735 positions in the final dataset. Evolutionary analyses were conducted in MEGAX

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