Fig. 2

Comparison of alpha diversity between host clades. A At order-level, B by dietary behavior, C order level sub-stratified by sampling location and (D) ruminant phenotype. Alpha diversity measured as Shannon diversity, differed between host order clades in a manner that largely reflected dietary preferences but with little association to location. Analysis of pairwise differences was performed using ANOVA, correcting for location. ***: p.adj < 0.001, **: p.adj < 0.01