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Table 3 Comparative expression analysis of cellulase genes in three isolates

From: Genome sequencing and identification of cellulase genes in Bacillus paralicheniformis strains from the Red Sea

  

SB2

SB3

Orthologue

GH

Gene

Inducing

Non

inducing

Ratio

Gene

Inducing

Non

inducing

Ratio

Cel-1

GH1

GENE_2609

188.18

81.24

2.32

GENE_4396

3.23

0.18

18.22

Cel-2

GH1

GENE_2582

66.47

37.67

1.76

GENE_4369

347.44

17.03

20.40

Cel-3

GH1

GENE_3145

15.46

7.49

2.07

GENE_288

157.71

7.62

20.70

Cel-4

GH1

GENE_2557

7.90

2.82

2.80

GENE_4343

19.90

0.00

CMC

Cel-5

GH1

GENE_958

949.03

2.29

414.79

GENE_2665

21.05

6.57

3.21

Cel-6

GH3

GENE_2942

30.19

0.78

38.78

GENE_74

261.19

0.91

288.46

Cel-7

GH5

GENE_443

48.48

261.73

0.19

GENE_2102

4.23

2.26

1.87

Cel-8

GH9

GENE_173

1.23

0.35

3.48

GENE_1821

43.32

2.08

20.87

Cel-9

GH26

GENE_3511

21.97

6.73

3.26

GENE_679

13.55

7.48

1.81

Cel-10

GH48

GENE_174

4.51

0.66

6.87

GENE_1822

16.64

4.61

3.61

  1. Values in inducing and non-inducing columns represent RPKM in each condition. Ratio columns represents ratio of RPKM values in these two conditions. ”CMC” at the ratio column means the expression specific to the non-inducing condition
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BMC Microbiology

ISSN: 1471-2180

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