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Table 3 Antimicrobial resistance genes detected in 104 whole-genome sequences of A. baumannii originating from Germany and deposited in NCBI

From: WGS based analysis of acquired antimicrobial resistance in human and non-human Acinetobacter baumannii isolates from a German perspective

No. Name of gene Group Frequency (n = 104) Percentage 100% Predicted Phenotype Accession No.
1 aph(3′)-VI PHT 7 6.7 Amikacin, Kanamycin NG_051730.1
2 aph(3′)-VIa PHT 24 23 NG_047448.1
3 aph(3′)-VIb PHT 2 1.9 NG_047449.1
4 aac(6′)-Ib ACT 3 2.9 Aminoglycoside NG_051695.1
5 aacA16 ACT 6 5.7 NG_052380.1
6 aac(3)-I ACT 22 21 Gentamicin NG_047234.1
7 aac(3)-IId ACT 1 0.96 NG_047251.1
8 armA MET 22 21 NG_052432.1
9 ant(2″)-Ia NUT 13 12.5 Gentamicin; Kanamycin; Tobramycin NG_047431.1
10 aph(3′)-Ia PHT 28 27 Kanamycin NG_052432.1
11 aadA1 NUT 22 21 Streptomycin NG_047327.1
12 aadA2 NUT 1 0.96 NG_051846.1
13 aadA5 NUT 1 0.96 NG_047357.1
14 aph(3″)-Ib PHT 48 46 NG_047413.1
15 aph(6)-Id PHT 45 43 NG_047464.1
16 ant(3″)-IIa PHT 104 100 Streptomycin; Spectinomycin NG_054646.1
17 blaCARB-16 CARB-5 1 0.96 Beta-Lactam NG_048718.1
18 blaNmca Class A 1 0.96 NG_055474.1
19 blaOXA-699 Single 1 0.96 NG_062321.1
20 blaOXA-735 Single 1 0.96 NG_062267.1
21 blaTEM-1 TEM 1 0.96 NG_050145.1
22 ble-MBL BRP 3 2.9 Bleomycin NG_047559.1
23 blaNDM-1 NDM 3 2.9 Carbapenem NG_049326.1
24 blaOXA-100 OXA-51 6 5.7 NG_049394.1
25 blaOXA-104 1 0.96 NG_049397.1
26 blaOXA-126 1 0.96 NG_049425.1
27 blaOXA-208 4 3.8 NG_049506.1
28 blaOXA-314 1 0.96 NG_049608.1
29 blaOXA-317 1 0.96 NG_049611.1
30 blaOXA-365 1 0.96 NG_049658.1
31 blaOXA-374 2 1.9 NG_049665.1
32 blaOXA-378 2 1.9 NG_049669.1
33 blaOXA-430 3 2.9 NG_049717.1
34 blaOXA-51 1 0.96 NG_049788.1
35 blaOXA-64 12 11.5 NG_049804.1
36 blaOXA-66 40 38.5 NG_049806.1
37 blaOXA-68 5 4.8 NG_049808.1
38 blaOXA-69 11 10.6 NG_049809.1
39 blaOXA-88 1 0.96 NG_049828.1
40 blaOXA-90 2 1.9 NG_049831.1
41 blaOXA-94 3 2.9 NG_049835.1
42 blaOXA-98 1 0.96 NG_049839.1
43 blaOXA-23 OXA-23 43 41 NG_049525.1
44 blaOXA-164 OXA-58 3 2.9 NG_049463.1
45 blaOXA-72 OXA-40 10 9.6 NG_049813.1
46 blaOXA-558 Single 4 3.8 NG_054702.1
47 catA1 catA 9 8.6 Chloramphenicol NG_047582.1
48 catB8 catB3 2 1.9 NG_047616.1
49 cmlA1 cmlA1 1 0.96 NG_047647.1
50 cmlA5 cmlA1 1 0.96 NG_051436.1
51 cmlB1 cmlB1 6 5.8 NG_047658.1
52 floR type E-3 3 2.8 Chloramphenicol; Florfenicol NG_047869.1
53 blaADC-101 ADC 2 1.9 Cephalosporin NG_051440.1
54 blaADC-11 3 2.9 NG_048635.1
55 blaADC-117 1 0.96 NG_064676.1
56 blaADC-120 3 2.9 NG_064678.1
57 blaADC-154 1 0.96 NG_054996.1
58 blaADC-155 2 1.9 NG_055285.1
59 blaADC-156 1 0.96 NG_055286.1
60 blaADC-158 1 0.96 NG_055786.1
61 blaADC-160 1 0.96 NG_055788.1
62 blaADC-163 1 0.96 NG_056105.1
63 blaADC-165 1 0.96 NG_056107.1
64 blaADC-166 8 7.7 NG_056108.1
65 blaADC-167 1 0.96 NG_056109.1
66 blaADC-179 1 0.96 NG_061395.1
67 blaADC-184 1 0.96 NG_064707.1
68 blaADC-185 1 0.96 NG_064708.1
69 blaADC-186 3 2.9 NG_064709.1
70 blaADC-192 1 0.96 NG_064715.1
71 blaADC-25 2 1.9 NG_048649.1
72 blaADC-26 6 5.8 NG_048650.1
73 blaADC-30 15 14.4 NG_048652.1
74 blaADC-32 2 1.9 NG_050717.1
75 blaADC-57 4 3.8 NG_051494.1
76 blaADC-6 1 0.96 NG_048669.1
77 blaADC-73 19 18 NG_048678.1
78 blaADC-74 4 3.8 NG_048679.1
79 blaADC-76 5 4.8 NG_048681.1
80 blaADC-79 7 6.7 NG_048684.1
81 blaADC-80 1 0.96 NG_048686.1
82 blaADC-95 1 0.96 NG_051459.1
83 blaADC-96 1 0.96 NG_051460.1
84 blaCMY-30 CMY 1 0.96 NG_048825.1
85 blaCTX-M−15 CTX-M−15 1 0.96 NG_048935.1
86 blaGES-11 GES 1 0.96 NG_049113.1
87 blaPER-1 PER 2 1.9 NG_049960.1
88 blaPER-10 1 0.95 NG_059319.1
89 blaTEM-12 TEM 19 18 NG_050163.1
90 mph(E) mph(E) 34 32.7 Macrolide NG_064660.1
91 msr(E) msr(E) 33 31.7 NG_048007.1
92 arr-2   1 0.96 Rifamycin NG_048580.1
93 sat2_gen   4 3.8 Streptothricin NG_048068.1
94 sul1   22 21 Sulfonamide NG_048082.1
95 sul2   47 45 NG_051852.1
96 Tet.39 tet efflux 7 6.7 Tetracycline NG_048137.1
97 Tet.A 6 5.8 NG_048154.1
98 Tet.B 38 36.5 NG_048163.1
99 dfrA1 dfrA 4 3.8 Trimethoprim NG_047676.1
100 dfrA17 1 0.96 NG_047710.1
101 dfrA7 1 0.96 NG_047737.1
  1. BRP bleomycin resistant protein, ACT acetyltransferase, MET methyltransferase, NUTN ucleotidyltransferase, PHT phosphotransferase
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