Table 1 Distribution of vaginal sample cluster profiles between 16S rRNA gene sequencing results and IS-pro results, respectively. Only samples successfully analyzed by both techniques are shown. It is expressed in percentage how many profiles with IS-pro matched the profile analyzed with 16S sequencing
16S rRNA gene sequencing vaginal profiles (n = 294) | |||||||
|---|---|---|---|---|---|---|---|
Cluster | Diverse n = 38 | L. crispatus n = 132 | L. gasseri n = 17 | L. iners n = 74 | L. jensenii n = 22 | Other n = 11 | |
IS-pro vaginal profiles (n = 297) | Diverse n = 12 | 6 (15.8%) | 2 | 2 | |||
L. crispatus n = 133 | 4 | 113 (85.6%) | 3 | 6 | 3 | 3 | |
L. gasseri n = 14 | 4 | 1 | 8 (47.1%) | 1 | |||
L. iners n = 129 | 21 | 16 | 4 | 68 (91.9%) | 13 | 7 | |
L. jensenii n = 7 | 1 | 6 (27.3%) | |||||
Other n = 2 | 2 | ||||||