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Table 3 Genes related to metabolism in P. polymyxa SC2

From: Interactional mechanisms of Paenibacillus polymyxa SC2 and pepper (Capsicum annuum L.) suggested by transcriptomics

Type gene product log2FC(SH/S)
Fructose and mannose metabolism PPSC2_05870 glycosyl hydrolase 2.69
PPSC2_05910 GDP-mannose 4,6-dehydratase 7.84
PPSC2_05865 mannose-1-phosphate guanylyltransferase 3.29
PPSC2_02440 PTS friuctose transporter subunit IIB 3.46
PPSC2_24735 rhamnose isomerase −2.09
PPSC2_02450 PTS mannose transporter subunit IID 2.2
PPSC2_05905 GDP-L-fucose synthase 6.89
PPSC2_02445 PTS mannose transporter subunit IIC 2.51
PPSC2_24740 rhamnulose-1-phosphate aldolase −2.43
PPSC2_02435 PTS mannose transporter subunit IID 3.96
Starch and sucrose metabolism PPSC2_05860 UDP-glucose 6-dehydrogenase 4.22
PPSC2_05940 UDP-glucose 6-dehydrogenase 6.53
PPSC2_16055 pectin methylesterase 3.4
PPSC2_03770 levansucrase 3.25
PPSC2_05805 UTP-glucose-1-phosphate uridylyltransferase 5.83
PPSC2_03430 PTS beta-glucoside transporter subunit IIABC −4.99
PPSC2_03425 trehalose-6-phosphate hydrolase −4.69
PPSC2_13470 glucose-1-phosphate adenylyltransferase −3.71
Glycerolipid metabolism PPSC2_09660 phosphate acyltransferase 2.53
PPSC2_00395 aldehyde dehydrogenase 6.65
PPSC2_15995 glycerol dehydrogenase −2.61
Alanine, aspartate and glutamate metabolism PPSC2_01185 asparagine synthetase 4.66
PPSC2_25355 adenylosuccinate synthetase −2.86
PPSC2_14255 aspartate ammonia-lyase 3.69
PPSC2_12155 acetylornithine aminotransferase 6.28
PPSC2_06000 asparagine synthase 5.58
PPSC2_22115 glutamine--fructose-6-phosphate aminotransferase −2.9
PPSC2_16495 aspartate carbamoyltransferase −2.11
Valine, leucine and isoleucine biosynthesis PPSC2_09040 transferase 2.34
PPSC2_07085 2-isopropylmalate synthase 2.76
PPSC2_07090 3-isopropylmalate dehydrogenase −2.59
PPSC2_00400   7.88