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Table 2 New SMART codes generated by Sub-Saharan African salmonella serotypes as compared to existing serotype specific codes

From: Serotyping of sub-Saharan Africa Salmonella strains isolated from poultry feces using multiplex PCR and whole genome sequencing

Serotypes

New SMART codes

Exisiting SMART code from Leader et al. 2009

Hato

1–2–5-6-11

None

1–2–5-6-8-11-13

1–2–5-6-10-11

1–2–5-6-7-10-11

1–2–4-5-6-11

Typhimurium

1–5–7-9-11-16

1–2–5-6-7-8-11-12-13-14-16

1–5–6-7-11-16

1–2–5-10-11-13-16

Kentucky

1–2–4-5-6-10-11-13-16

1–5–6-9-11

1–2–5-11-16

1–2–5-10-11-13-16

1–2–5-10-11-16

Derby

1–2–5-6-11-13

1–2–5-6-7-11-14

1–2–5-6-11

1–2–5-6-7-8-11-12-13-14-16

1–2–5-6-10-11

1–2–5-6-7-10-11-13

1–2–5-6-11-13

1–2–5-6-11

1–2–5-6-10-11

1–2–5-6-10-11-13

Muenster

1–5–6-7-10-11-16

1–5–6-7-9-11

Schwarzengrund

1–5–6-11-16

1–5–6-7-11

Tennessee

1–2–5-11-13

None

Telelkebir

1–5–6-7-9-11-16

1–5–6-7-11

Brancaster

1–2–5-6-11-13

None

1–2–5-6-7-10-11

1–2–5-6-7-10-11-13

1–5–6-7-11-13-16

1,3,19:b:-

1–5–6-7-11-13

None

1,3,19:f,g:1,5

1–2–5-6-11-13-16

None

39:z10:e,n,z15

1–2–4-5-10-11-13-16

None

1–7–9-10-11-16

Albany or Duesseldorf

1–2–5-6-11

None

Chester

1–5–7-9-11-16

1–5–7-11

Jedburgh

1–2–5-7-11-13

None

Amoutive

1–2–5-11-13-16

None

Gaminara

1–2–5-6-7-10-11-13

None

1–2–5-6-11-13

Anatum

1–2–5-6-7-11-16

1–2–5-6-7-11-12

Alexanderplatz

1–2–5-6-9-11

None

Eastbourne

1–3–5-7-10-11-16

None

Poona

1–7–9-10-11-16

1–6–7-9-10-11

Drac

1–5–6-7-9-11-16

None