CE
|
MatrixName for a 1st element
|
S1
|
Distance in between
|
MatrixName for a 2nd element
|
S2
|
Positiona
|
orientation
|
CS
|
P-Value
|
Sequence
|
---|
CE00047
|
V$POU1F1_Q6
|
0.935
|
−1
|
V$OCT1_04
|
0.949
|
− 239
|
–
|
−0.004
|
7.72e-06
|
ATGCATATTTGCATGGTGATAC
|
CE00058
|
V$NFKB_Q6_01
|
0.937
|
5
|
V$HMGIY_Q6
|
0.995
|
− 300
|
+
|
−0.46
|
1.22e-05
|
ACGTGGGAAAAT
|
CE00158
|
V$OCT_C
|
0.907
|
10
|
V$AP1_01
|
0.869
|
−236
|
–
|
−0.232
|
1.88e-04
|
CATATTTGCATGGTGATACATTT
|
CE00058
|
V$NFKB_Q6_01
|
0.791
|
6
|
V$HMGIY_Q6
|
0.995
|
− 301
|
+
|
−0.181
|
1.05e-03
|
AACGTGGGAAAAT
|
CE00186
|
V$ETS_Q6
|
0.936
|
13
|
V$CEBPA_01
|
0.942
|
−107
|
–
|
−1.049
|
6.55e-03
|
CTTTCCTTTaactTGATTGTGAAATCA
|
CE00249
|
V$IRF_Q6
|
0.924
|
5
|
V$PU1_Q6
|
0.839
|
− 111
|
+
|
−0.314
|
1.01e-02
|
TCCCCTTTCCTTT
|
CE00078
|
V$GR_Q6
|
0.914
|
39
|
V$CEBPB_02
|
0.799
|
− 377
|
+
|
0.049
|
2.37e-02
|
GAAGAAAAGTATGTGCATGTataaatctgtgtgtcttccACTTTGTCCCACAT
|
CE00186
|
V$ETS_Q6
|
0.896
|
20
|
V$CEBPA_01
|
0.942
|
− 120
|
–
|
−0.793
|
2.73e-02
|
TTTTCCCCTttcctttaactTGATTGTGAAATCA
|
CE00135
|
V$ETS_Q6
|
0.781
|
25
|
V$MYB_Q5_01
|
0.974
|
− 292
|
–
|
0.002
|
4.31e-02
|
AAATCCAGTattttaatgtggacatCAACTGCAC
|
- CE Composite regulatory element, S1,2 PWM scores for the first and second elements, CS Composite score
- aBeginning of the element relative to TSS