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Table 1 The number of modules extracted from the data by the SPD algorithm

From: The identification of co-expressed gene modules in Streptococcus pneumonia from colonization to infection to predict novel potential virulence genes

Sample source No. of all modules No. of selected modules No. of top modules (No. of each module’s genes)
Nasopharynx and lung 182 30 2 (13, 10)
Lung and blood 160 10 2 (7, 9)
Blood and brain 138 13 2 (3, 14)
Nasopharynx, lung, and blood 179 15 2 (5, 8)
Lung, blood, and brain 160 12 1 (3)
Nasopharynx, lung, blood, and brain 169 18 2 (4, 3)