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Table 2 Primers and probe sequences targeting ITS-2 region of ribosome DNA in A. tetraptera

From: Standardization of an LNA-based TaqMan assay qPCR analysis for Aspiculuris tetraptera DNA in mouse faeces

Primer/Probe

Sequence

Tm (°C)

Product size (bp)

Normal oligo primer Fw

ATACTCTTTGACGCATACACAC

58.2

75

Normal oligo primer Rv

CAGCCATAGGTATTGTTATATGAGC

61.4

LNA oligo primer Fw

ATACTCTTTGACGCATACACAC

63

75

LNA oligo primer Rv

CAGCCATAGGTATTGTTATATGAGC

63

LNA TaqMan probe

FAM/CATACACACCGTATATGTGTTGC/3IABkFQ

57

  1. Bold letters with underline indicates LNA-modified bases