Genome-based characterization of two Colombian clinical Providencia rettgeri isolates co-harboring NDM-1, VIM-2, and other β-lactamases

Table 2 rST and β-lactamase presence in GMR-RA257, GMR-RA1153 and 16 Providencia rettgeri genomes previously reported

Isolated	AC DDBJ/ENA/GenBank	Country	Year	rST	β-lactamases
GMR-RA257	VRPG00000000	Colombia	2015	61,696	bla_NDM-1 bla_OXA-10 bla_CMY-2 bla_CTX-M-15 bla_TEM-1 bla_VIM-2
GMR-RA1153	VRPH00000000	Colombia	2015	61,696	bla_NDM-1 bla_OXA-10 bla_CMY-2 bla_CTX-M-15 bla_TEM-1 bla_VIM-2
RB151	NZ_CP017671	Colombia	2013	61,696	bla_NDM-1 bla_OXA-2 bla_TEM-1
FDAARGOS_330	NZ_CP027418	USA	2015	61,696	N/A
Dmel1	NZ_CM001774	USA	2012	37,417	N/A
DSM1131	ACCI00000000	USA	2009	37,410	N/A
AR_0082	NZ_CP029736	USA	2015	NA	bla_NDM-1
UBA5024	DICO00000000	USA	2015	NA	N/A
PR1	NOWC00000000	USA	2016	63,059	bla_PER-7 bla_IMP-27 bla_IMP-64 bla_IMP-67
CCBH1880	JSEQ00000000	Brazil	2014	37,423	bla_NDM-1 bla_OXA-10
729–12	LYBX00000000	Brazil	2012	NA	N/A
PR002	NXKD00000000	South Africa	2013	63,070	bla_OX1–1 bla_OXA-2 bla_OXA-10 bla_PER-7
H1736	CVLT00000000	Israel	2011	37,424	bla_NDM-1 bla_OXA-10
MR4	LCVM00000000	India	2013	NA	N/A
TUM9994	BGMI00000000	Japon	2010	NA	bla_CTX-M-62
Pret_2032	QKNQ00000000	Spain	2015	NA	bla_NDM-1 bla_CARB-2 bla_FOX-5 bla_OXA-1 bla_VIM-1
NCTC11801	UGTZ00000000	United Kingdom	Strain Collection	NA	N/A
NCTC7476	UAUG00000000	United Kingdom	Strain Collection	NA	N/A

NA Not assigned rST because the ribosomal gene alleles in the genome have not been previously reported to the BIGSdb platform
N/A not available

ISSN: 1471-2180