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Table 2 Differential taxa abundance between TSCDA and TSCDI group in this study

From: Response of the gut microbiota during the Clostridioides difficile infection in tree shrews mimics those in humans

  Taxa Abundance after
C. difficile infection
P value
Phylum Proteobacteria Increase 0.002
Fusobacteria Decrease 0.001
Bacteroidetes Decrease 0.004
Epsilonbacteraeota Decrease 0.002
Class Clostridia Increase 0.001
Gammaproteobacteria Increase 0.000
Fusobacteriia Decrease 0.001
Bacteroidia Decrease 0.002
Campylobacteria Decrease 0.002
Order Clostridiales Increase 0.001
Enterobacteriales Increase 0.001
Fusobacteriales Decrease 0.001
Bacteroidales Decrease 0.003
Campylobacterales Decrease 0.002
Family Lachnospiraceae Increase 0.019
Enterobacteriaceae Increase 0.001
Clostridiaceae Increase 0.000
Fusobacteriaceae Decrease 0.001
Bacteroidaceae Decrease 0.004
Helicobacteraceae Decrease 0.003
Genus Escherichia Increase 0.001
Clostridium Increase 8.77E-05
Fusobacterium Decrease 0.001
Bacteroides Increase 0.004
Blautia Increase 0.028
Tyzzerella Increase 0.005
Helicobacter Decrease 0.003