Table 6 Canonical single nucleotide polymorphisms (canSNPs) used for delineating Bacillus anthracis sub-lineages and corresponding nucleotides identified among the isolates from the present study
B. anthracis sublineages | 13 canonical SNP sites | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A.Br.001 | A.Br.002 | A.Br.003 | A.Br.004 | A.Br.006 | A.Br.007 | A.Br.008 | A.Br.009 | B.Br.001 | B.Br.002 | B.Br.002 | B.Br.002 | A/ B.Br.001 | |
C.Br.A1055 | T | G | A | T | C | T | T | A | T | G | G | T | G |
B.Br.KrugerB | T | G | A | T | C | T | T | A | C | T | A | T | A |
B.Br.001/002 | T | G | A | T | C | T | T | A | T | T | A | T | A |
B.Br.CNEVA | T | G | A | T | C | T | T | A | T | G | A | C | A |
A.Br.Ames | C | A | G | C | A | T | T | A | T | G | C | T | A |
A.Br.001/002 | T | A | G | C | A | T | T | A | T | G | G | T | A |
A.Br.Aust94 | T | G | G | C | A | T | T | A | T | G | G | T | A |
A.Br.003/004 | T | G | A | C | A | T | T | A | T | G | G | T | A |
A.Br.Vollum | T | G | A | T | A | C | T | A | T | G | G | T | A |
A.Br.005/006 | T | G | A | T | A | T | T | A | T | G | G | T | A |
A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | A |
A.Br.WNA | T | G | A | T | A | T | G | G | T | G | G | T | A |
DFRL.BHE 1–12a (A.Br.Aust94) | T | G | G | C | A | T | T | A | T | G | G | T | A |