Fig. 4

SNPs within genes presented in Tn6002 transposon. Genes with sequences identical between a particular strain and the corresponding gene in the Tn6002 are coloured in dark brown. Genes with sequences differing to reference in one SNP same for more samples are coloured in shades of green, these differing in more SNPs same for more samples in shades of blue. Genes which were not found in particular genomes are coloured in grey. Country of origin and resistance (R, resistant; S, susceptible) are indicated alongside the strain identifiers. Inducible clindamycin resistance is marked with “!” in the last column. Labelled are genes associated with resistance and gene transfer. (TR, transcriptional regulator; CJG, conjugal transfer protein; TTD, tetracycline resistance determinant leader peptide; tps, transposase; tls, translocase)