Table 1 Information for the wApol genome sequences
From: Pseudoscorpion Wolbachia symbionts: diversity and evidence for a new supergroup S
wApol K5 | wApol K3 | ||
|---|---|---|---|
Before assembly | Illumina reads without enrichment | 76,487,892 | 8,349,854 |
Illumina reads with enrichment | 8,714,832 | 7,422,205 | |
CCS PacBio reads without enrichment | 13,467 | 2091 | |
CCS PacBio reads with enrichment | 2032 | 13,070 | |
Selection of reads mapped to the assembly | Illumina reads without enrichment | 109,309 (0.4%) | 166,537 (1.99%) |
Illumina reads with enrichment | 1,912,222 (18%) | 1,428,179 (19.24%) | |
CCS PacBio reads without enrichment | 110 (0.8%) | 35 (1.6%) | |
CCS PacBio reads with enrichment | 885 (40.9%) | 3343 (25.57%) | |
Draft genome assembly | Number of contigs | 373 | 200 |
Size of the largest contig | 25,286 | 40,755 | |
Total length (bp) | 1,445,964 | 1,404,177 | |
Contigs > = 10,000 bp | 28 | 43 | |
N50 | 5741 | 10,346 | |
L50 | 73 | 40 | |
GC% | 35.61 | 35.49 | |
Number of Coding Sequences | 1746 | 2215 | |
Number of RNAs | 39 | 45 | |
BUSCO analysis | Complete BUSCOs % | 70.2% | 69% |
Fragmented BUSCOs % | 7.2% | 8.2% | |
Missing BUSCOs % | 22.6% | 22% |