TY - JOUR AU - Mian, M. A. R. AU - Missaoui, A. M. AU - Walker, D. R. AU - Phillips, D. V. AU - Boerma, H. R. PY - 2008 DA - 2008// TI - Frogeye leaf spot of soybean: a review and proposed race designations for isolates of Cercospora sojina Hara JO - Crop Sci VL - 48 UR - https://doi.org/10.2135/cropsci2007.08.0432 DO - 10.2135/cropsci2007.08.0432 ID - Mian2008 ER - TY - JOUR AU - Nascimento, K. J. T. AU - Debona, D. AU - França, S. K. S. AU - Gonçalves, M. G. M. AU - DaMatta, F. M. AU - Rodrigues, A. PY - 2014 DA - 2014// TI - Soybean resistance to Cercopora sojina infection is reduced by silicon JO - Phytopathology. VL - 104 UR - https://doi.org/10.1094/PHYTO-02-14-0047-R DO - 10.1094/PHYTO-02-14-0047-R ID - Nascimento2014 ER - TY - JOUR AU - Kim, J. -. S. AU - Lee, Y. -. S. AU - Kim, S. -. K. AU - Kim, K. D. AU - Kim, J. -. W. PY - 2011 DA - 2011// TI - Differential responses of soybean cultivars to Cercospora sojina isolates, the causal agent of frogeye leaf spot in Korea JO - Plant Pathol VL - 27 UR - https://doi.org/10.5423/PPJ.2011.27.2.183 DO - 10.5423/PPJ.2011.27.2.183 ID - Kim2011 ER - TY - CHAP AU - Yorinori, J. T. AU - Henechin, M. PY - 1978 DA - 1978// TI - Races of Cercospora sojina in parajme Brazil BT - 3rd international congress of plant pathology PB - Parey CY - Berlin ID - Yorinori1978 ER - TY - JOUR AU - Mian, R. AU - Bond, J. AU - Joobeur, T. PY - 2009 DA - 2009// TI - Identification of soybean genotypes resistant to Cercospora sojina by field screening and molecular markers JO - Plant Dis VL - 93 UR - https://doi.org/10.1094/PDIS-93-4-0408 DO - 10.1094/PDIS-93-4-0408 ID - Mian2009 ER - TY - JOUR AU - Dong, Z. M. AU - Li, Z. AU - Liu, J. PY - 2017 DA - 2017// TI - Advances in research on Cercospora sojina JO - Crops. VL - 3 ID - Dong2017 ER - TY - JOUR AU - Ding, J. J. AU - Gu, X. AU - Yang, X. H. AU - Zhao, H. H. AU - Shen, H. B. AU - Jiang, C. L. AU - Shi, X. L. AU - Liu, C. Y. AU - Hu, G. H. AU - Chen, Q. S. PY - 2012 DA - 2012// TI - Analysis of race and genetic relationship of Cercospora sojina in Heilongjiang Province JO - Sci Agric Sin VL - 45 ID - Ding2012 ER - TY - JOUR AU - Jiang, C. L. AU - Ding, J. J. AU - Wen, J. Z. AU - Hu, G. H. AU - Chen, Q. S. AU - Liu, C. Y. PY - 2011 DA - 2011// TI - Identification and mapping of the Cercospora sojina race 15 resistance gene in soybean JO - J Plant Protect VL - 38 ID - Jiang2011 ER - TY - JOUR AU - Yu, J. H. AU - Keller, N. PY - 2005 DA - 2005// TI - Regulation of secondary metabolism in filamentous fungi JO - Annu Rev Phytopathol VL - 43 UR - https://doi.org/10.1146/annurev.phyto.43.040204.140214 DO - 10.1146/annurev.phyto.43.040204.140214 ID - Yu2005 ER - TY - JOUR AU - Goodwin, S. B. AU - Dunkle, L. D. AU - Zismann, V. L. PY - 2001 DA - 2001// TI - Phylogenetic analysis of Cercospora and Mycosphaerella based on the internal transcribedspacer region of ribosomal DNA JO - Phytopathology. VL - 91 UR - https://doi.org/10.1094/PHYTO.2001.91.7.648 DO - 10.1094/PHYTO.2001.91.7.648 ID - Goodwin2001 ER - TY - JOUR AU - Luo, X. AU - Cao, J. AU - Huang, J. AU - Wang, Z. AU - Guo, Z. AU - Chen, Y. PY - 2018 DA - 2018// TI - Genome sequencing and comparative genomics reveal the potential pathogenic mechanism of Cercospora sojina Hara on soybean JO - DNA Res VL - 25 UR - https://doi.org/10.1093/dnares/dsx035 DO - 10.1093/dnares/dsx035 ID - Luo2018 ER - TY - JOUR AU - Liu, G. Y. AU - Nizet, V. PY - 2009 DA - 2009// TI - Color me bad: microbial pigments as virulence factors JO - Trends Microbiol VL - 17 UR - https://doi.org/10.1016/j.tim.2009.06.006 DO - 10.1016/j.tim.2009.06.006 ID - Liu2009 ER - TY - JOUR AU - Boraston, A. B. AU - Bolam, D. N. AU - Gilbert, H. J. AU - Davies, G. J. PY - 2004 DA - 2004// TI - Carbohydrate-binding modules: fine-tuning polysaccharide recognition JO - Biochem J VL - 382 UR - https://doi.org/10.1042/BJ20040892 DO - 10.1042/BJ20040892 ID - Boraston2004 ER - TY - JOUR AU - Wang, Y. AU - Wu, J. AU - Park, Z. Y. AU - Kim, S. G. AU - Rakwal, R. AU - Agrawal, G. K. AU - Kim, S. T. AU - Kang, K. Y. PY - 2011 DA - 2011// TI - Comparative secretome investigation of Magnaporthe oryzae proteins responsive to nitrogen starvation JO - Proteome Res VL - 10 UR - https://doi.org/10.1021/pr200202m DO - 10.1021/pr200202m ID - Wang2011 ER - TY - JOUR AU - Donofrio, N. M. AU - Oh, Y. AU - Lundy, R. AU - Pan, H. AU - Brown, D. E. AU - Jeong, J. S. AU - Coughlan, S. AU - Mitchell, T. K. AU - Dean, R. A. PY - 2006 DA - 2006// TI - Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe oryzae JO - Fungal GenetBiol VL - 43 UR - https://doi.org/10.1016/j.fgb.2006.03.005 DO - 10.1016/j.fgb.2006.03.005 ID - Donofrio2006 ER - TY - JOUR AU - Larsson, C. AU - Stockar, U. AU - Marison, I. AU - Gustafsson, L. PY - 1993 DA - 1993// TI - Growth and metabolism of Saccharomyces cerevisiae in chemist at cultures under carbon-, nitrogen, or carbon- and nitrogen-limiting conditions JO - J Bacteriol VL - 175 UR - https://doi.org/10.1128/JB.175.15.4809-4816.1993 DO - 10.1128/JB.175.15.4809-4816.1993 ID - Larsson1993 ER - TY - JOUR AU - Wang, Y. AU - Wu, J. AU - Park, Z. Y. AU - Kim, S. G. AU - Rakwal, R. AU - Agrawal, G. K. AU - Kim, S. T. AU - Kang, K. Y. PY - 2011 DA - 2011// TI - Comparative secretome investigation of Magnaporthe oryzae proteins responsive to nitrogen starvation JO - J Proteome Res VL - 10 UR - https://doi.org/10.1021/pr200202m DO - 10.1021/pr200202m ID - Wang2011 ER - TY - JOUR AU - Talbot, N. J. AU - Mccafferty, H. R. K. AU - Ma, M. PY - 1997 DA - 1997// TI - Nitrogen starvation of the rice blast fungus Magnaporthe grisea may act as an environmental cue for disease symptom expression JO - Physiol Mol Plant Pathol VL - 50 UR - https://doi.org/10.1006/pmpp.1997.0081 DO - 10.1006/pmpp.1997.0081 ID - Talbot1997 ER - TY - JOUR AU - Bell, A. A. AU - Wheeler, M. H. PY - 1986 DA - 1986// TI - Biosynthesis and function of fungal melanins JO - Annu Rev Phytopathol VL - 24 UR - https://doi.org/10.1146/annurev.py.24.090186.002211 DO - 10.1146/annurev.py.24.090186.002211 ID - Bell1986 ER - TY - JOUR AU - Henson, J. M. AU - Butler, M. J. AU - Day, A. W. PY - 1999 DA - 1999// TI - The dark side of the mycelium: melanins of phytopathogenic fungi JO - Annu RevPhytopathol VL - 37 UR - https://doi.org/10.1146/annurev.phyto.37.1.447 DO - 10.1146/annurev.phyto.37.1.447 ID - Henson1999 ER - TY - JOUR AU - Larraya, L. M. AU - Boyce, K. J. AU - So, A. AU - Steen, B. R. AU - Jones, S. AU - Marra, M. AU - Kronstad, J. W. PY - 2005 DA - 2005// TI - Serial analysis of gene expression reveals conserved links between protein kinase a, ribosome biogenesis and phosphate metabolism in Ustilago maydis JO - Eukaryot Cell VL - 4 UR - https://doi.org/10.1128/EC.4.12.2029-2043.2005 DO - 10.1128/EC.4.12.2029-2043.2005 ID - Larraya2005 ER - TY - JOUR AU - Boyce, K. J. AU - Kretschmer, M. AU - Kronstad, J. W. PY - 2006 DA - 2006// TI - The vtc4 gene influences polyphosphate storage, morphogenesis, and virulence in the maize pathogen Ustilago maydis JO - Eukaryot Cell VL - 5 UR - https://doi.org/10.1128/EC.00131-06 DO - 10.1128/EC.00131-06 ID - Boyce2006 ER - TY - JOUR AU - Tseng, M. N. AU - Chung, P. C. AU - Tzean, S. S. PY - 2011 DA - 2011// TI - Enhancing the stress tolerance and virulence of an entomopathogen by metabolic engineering of dihydroxynaphthalene melanin biosynthesis genes JO - Appl Environ Microbiol VL - 77 UR - https://doi.org/10.1128/AEM.02033-10 DO - 10.1128/AEM.02033-10 ID - Tseng2011 ER - TY - JOUR AU - Zamocky, M. AU - Ludwig, R. AU - Peterbauer, C. AU - Hallberg, B. M. AU - Divne, C. AU - Nicholls, P. AU - Haltrich, D. PY - 2006 DA - 2006// TI - Cellobiose dehydrogenase–a flavocytochrome from wood-degrading, phytopathogenic and saprotropic fungi JO - Curr Protein Pept Sci VL - 7 UR - https://doi.org/10.2174/138920306777452367 DO - 10.2174/138920306777452367 ID - Zamocky2006 ER - TY - JOUR AU - Eisenman, H. C. AU - Casadevall, A. PY - 2012 DA - 2012// TI - Synthesis and assembly of fungal melanin JO - Appl Microbiol Biotechnol VL - 93 UR - https://doi.org/10.1007/s00253-011-3777-2 DO - 10.1007/s00253-011-3777-2 ID - Eisenman2012 ER - TY - JOUR AU - Butler, M. J. AU - Day, A. W. PY - 1998 DA - 1998// TI - Fungal melanins: a review JO - CanJ Microbiol VL - 44 UR - https://doi.org/10.1139/w98-119 DO - 10.1139/w98-119 ID - Butler1998 ER - TY - JOUR AU - Lundqvist, T. AU - Rice, J. AU - Hodge, C. N. AU - Basarab, G. S. AU - Pierce, J. AU - Lindqvist, Y. PY - 1994 DA - 1994// TI - Crystal structure of scytalone dehydratase-a disease determinant of the rice pathogen, Magnaporthe grisea JO - Structure VL - 2 UR - https://doi.org/10.1016/S0969-2126(94)00095-6 DO - 10.1016/S0969-2126(94)00095-6 ID - Lundqvist1994 ER - TY - JOUR AU - Money, N. P. PY - 1998 DA - 1998// TI - Mechanics of invasive fungal growth and the significance of turgor in plant infection JO - Dev Plant Pathol VL - 107 ID - Money1998 ER - TY - JOUR AU - Chumley, F. G. AU - Valent, B. PY - 1990 DA - 1990// TI - Genetic analysis of melanin-deficient, nonpathogenic mutants of Magnaporthe grisea JO - Mol Plant-Microbe Interact VL - 3 UR - https://doi.org/10.1094/MPMI-3-135 DO - 10.1094/MPMI-3-135 ID - Chumley1990 ER - TY - JOUR AU - Perpetua, N. S. AU - Kubo, Y. AU - Takano, Y. AU - Furusawa, I. PY - 1996 DA - 1996// TI - Cloning and characterization of a melanin biosynthetic THR1 reductase gene essential for appressorial penetration of Colletotrichum Lagenarium JO - Mol Plant-Microbe Interact VL - 9 UR - https://doi.org/10.1094/MPMI-9-0323 DO - 10.1094/MPMI-9-0323 ID - Perpetua1996 ER - TY - JOUR AU - Kubo, Y. AU - Takano, Y. AU - Endo, N. AU - Yasuda, N. AU - Tajima, S. AU - Furusawa, I. PY - 1997 DA - 1997// TI - Cloning and structural analysis of the melanin biosynthesis gene SCD1 encoding scytalone dehydratase in Colletotrichum lagenarium JO - Appl Environ Microbiol VL - 62 UR - https://doi.org/10.1128/AEM.62.12.4340-4344.1996 DO - 10.1128/AEM.62.12.4340-4344.1996 ID - Kubo1997 ER - TY - JOUR AU - Takano, Y. AU - Kubo, Y. AU - Kuroda, I. AU - Furusawa, I. PY - 1997 DA - 1997// TI - Temporal transcriptional pattern of three melanin biosynthesis genes, PKS1, SCD1, and THR1, in appressorium-differentiating and nondifferentiating conidia of Colletotrichum lagenarium JO - Appl Environ Microbiol VL - 63 UR - https://doi.org/10.1128/AEM.63.1.351-354.1997 DO - 10.1128/AEM.63.1.351-354.1997 ID - Takano1997 ER - TY - JOUR AU - Kihara, J. AU - Moriwaki, A. AU - Ito, M. AU - Arase, S. AU - Honda, Y. PY - 2004 DA - 2004// TI - Expression of THR1, a 1,3,8-trihydroxynaphthalene reductase gene involved in melanin biosynthesis in the phytopathogenic fungus Bipolaris oryzae, is enhanced by near-ultraviolet radiation JO - Pigment Cell Melanoma Res VL - 17 UR - https://doi.org/10.1046/j.1600-0749.2003.00102.x DO - 10.1046/j.1600-0749.2003.00102.x ID - Kihara2004 ER - TY - JOUR AU - Perpetua, N. S. AU - Kubo, Y. AU - Yasuda, N. AU - Furusawa, I. PY - 1996 DA - 1996// TI - Cloning and characterization of a melanin biosynthetic THR1 reductase gene essential for appressorial penetration of Colletotrichum Lagenarium JO - Mol Plant-Microbe Interact VL - 9 UR - https://doi.org/10.1094/MPMI-9-0323 DO - 10.1094/MPMI-9-0323 ID - Perpetua1996 ER - TY - JOUR AU - Zhang, L. AU - Li, H. AU - Xiao, S. AU - Liu, Y. Y. AU - Li, G. F. AU - Xue, C. S. AU - Chen, J. PY - 2016 DA - 2016// TI - Efficient agrobacterium tumefaciens-mediated target gene disruption in the maize pathogen Curvularia lunata JO - Eur J Plant Pathol VL - 145 UR - https://doi.org/10.1007/s10658-015-0825-2 DO - 10.1007/s10658-015-0825-2 ID - Zhang2016 ER - TY - JOUR AU - Xue, C. AU - Wu, D. AU - Condon, B. J. AU - Bi, Q. AU - Wang, W. AU - Turgeon, B. G. PY - 2013 DA - 2013// TI - Efficient gene knockout in the maize pathogen Setosphaeria turcica, using, Agrobacterium tumefaciens-mediated transformation JO - Phytopathology. VL - 103 UR - https://doi.org/10.1094/PHYTO-08-12-0199-R DO - 10.1094/PHYTO-08-12-0199-R ID - Xue2013 ER - TY - JOUR AU - Liang, Y. AU - Xiong, W. AU - Steinkellner, S. AU - Feng, J. PY - 2018 DA - 2018// TI - Deficiency of the melanin biosynthesis genes SCD1 and THR1 affects sclerotial development and vegetative growth, but not pathogenicity, in Sclerotinia sclerotiorum JO - Mol Plant Pathol VL - 19 UR - https://doi.org/10.1111/mpp.12627 DO - 10.1111/mpp.12627 ID - Liang2018 ER - TY - JOUR AU - Kawamura, C. AU - Moriwaki, J. AU - Kimura, N. AU - Fujita, Y. AU - Fuji, S. AU - Hirano, T. AU - Koizumi, S. AU - Tsuge, T. PY - 1997 DA - 1997// TI - The melanin biosynthesis genes of Alternaria alternata can restore pathogenicity of the melanin-deficient mutants of Magnaporthe grisea JO - Mol Plant-Microbe Interact VL - 10 UR - https://doi.org/10.1094/MPMI.1997.10.4.446 DO - 10.1094/MPMI.1997.10.4.446 ID - Kawamura1997 ER - TY - JOUR AU - Kawamura, C. AU - Tsujimoto, T. AU - Tsuge, T. PY - 1999 DA - 1999// TI - Targeted disruption of a melanin biosynthesis gene affects conidial development and UV tolerance in the Japanese pear pathotype of Alternaria alternata JO - Mol Plant-Microbe Interact VL - 12 UR - https://doi.org/10.1094/MPMI.1999.12.1.59 DO - 10.1094/MPMI.1999.12.1.59 ID - Kawamura1999 ER - TY - JOUR AU - Hothorn, M. AU - Neumann, H. AU - Lenherr, E. D. AU - Wehner, M. AU - Rybin, V. AU - Hassa, P. O. AU - Uttenweiler, A. AU - Reinhardt, M. AU - Schmidt, A. AU - Seiler, J. AU - Ladurner, A. G. AU - Herrmann, C. AU - Scheffzek, K. PY - 2009 DA - 2009// TI - Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase JO - Science. VL - 324 UR - https://doi.org/10.1126/science.1168120 DO - 10.1126/science.1168120 ID - Hothorn2009 ER - TY - JOUR AU - Kulaev, I. AU - Kulakovskaya, T. PY - 2000 DA - 2000// TI - Polyphosphate and phosphate pump JO - Annu Rev Microbiol VL - 54 UR - https://doi.org/10.1146/annurev.micro.54.1.709 DO - 10.1146/annurev.micro.54.1.709 ID - Kulaev2000 ER - TY - JOUR AU - Ogawa, N. AU - DeRisi, J. AU - Brown, P. O. PY - 2000 DA - 2000// TI - New components of a systemfor phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis JO - Mol Biol Cell VL - 11 UR - https://doi.org/10.1091/mbc.11.12.4309 DO - 10.1091/mbc.11.12.4309 ID - Ogawa2000 ER - TY - JOUR AU - Kretschmer, M. AU - Reiner, E. AU - Hu, G. AU - Tam, N. AU - Oliveira, O. L. AU - Caza, M. AU - Yeon, J. H. AU - Kim, J. AU - Kastrup, C. J. AU - Jung, W. H. AU - Kronstad, J. W. PY - 2014 DA - 2014// TI - Defects in phosphate acquisition and storage influence virulence of Cryptococcus neoformans JO - Infect Immun VL - 82 UR - https://doi.org/10.1128/IAI.01607-14 DO - 10.1128/IAI.01607-14 ID - Kretschmer2014 ER - TY - JOUR AU - Larroque, M. AU - Barriot, R. AU - Bottin, A. AU - Barre, A. AU - Rougé, P. AU - Dumas, B. AU - Gaulin, E. PY - 2012 DA - 2012// TI - The unique architecture and function of cellulose-interacting proteins in oomycetes revealed by genomic and structural analyses JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-605 DO - 10.1186/1471-2164-13-605 ID - Larroque2012 ER - TY - JOUR AU - Varnai, A. AU - Siika-Aho, M. AU - Viikari, L. PY - 2013 DA - 2013// TI - Carbohydrate-binding modules (CBMs) revisited: reduced amount of water counterbalances the need for CBMs JO - Biotechnol Biofuels VL - 6 UR - https://doi.org/10.1186/1754-6834-6-30 DO - 10.1186/1754-6834-6-30 ID - Varnai2013 ER - TY - JOUR AU - Song, W. AU - Han, X. AU - Qian, Y. AU - Liu, G. AU - Yao, G. AU - Zhong, Y. AU - Qu, Y. PY - 2016 DA - 2016// TI - Proteomic analysis of the biomass hydrolytic potentials of Penicillium oxalicum lignocellulolytic enzyme system JO - Biotechnol Biofuels VL - 9 UR - https://doi.org/10.1186/s13068-016-0477-2 DO - 10.1186/s13068-016-0477-2 ID - Song2016 ER - TY - BOOK AU - Kuhn, P. J. AU - Trinci, A. P. J. AU - Jung, M. J. AU - Goosey, M. W. AU - Copping, L. G. PY - 1990 DA - 1990// TI - Biochemistry of cell walls and membranes in fungi PB - Springer-Verlag CY - Heidelberg UR - https://doi.org/10.1007/978-3-642-74215-6 DO - 10.1007/978-3-642-74215-6 ID - Kuhn1990 ER - TY - JOUR AU - Rapp, P. PY - 1992 DA - 1992// TI - Formation, separation and characterization of three β-1,3-glucanases from Sclerotium glucanicum JO - Biochim Biophys Acta VL - 1117 UR - https://doi.org/10.1016/0304-4165(92)90155-N DO - 10.1016/0304-4165(92)90155-N ID - Rapp1992 ER - TY - JOUR AU - Stahmann, K. P. AU - Pielken, P. AU - Schimz, K. L. AU - Sahm, H. PY - 1992 DA - 1992// TI - Degradation of extracellular β-(1,3)-(1,6)-D-glucan by botrytis cinerea JO - Appl EnvironMicrobiol VL - 58 ID - Stahmann1992 ER - TY - JOUR AU - Schaeffer, H. J. AU - Leykan, J. AU - Walton, J. D. PY - 1994 DA - 1994// TI - Cloning and targeted gene disruption of EXG1, encoding exo-β-1,3-glucanase, in the phytopathogenic fungus Cochliobolus carbonum JO - Appl Environ Microbiol VL - 60 UR - https://doi.org/10.1128/AEM.60.2.594-598.1994 DO - 10.1128/AEM.60.2.594-598.1994 ID - Schaeffer1994 ER - TY - JOUR AU - Yoder, O. C. AU - Turgeon, B. G. PY - 2001 DA - 2001// TI - Fungal genomics and pathogenicity JO - Curr Opin Plant Biol VL - 4 UR - https://doi.org/10.1016/S1369-5266(00)00179-5 DO - 10.1016/S1369-5266(00)00179-5 ID - Yoder2001 ER - TY - JOUR AU - BIgarashi, K. AU - Samejima, M. AU - Eriksson, K. E. L. PY - 1998 DA - 1998// TI - Cellobiose dehydrogenase enhances Phanerochaete chrysosporium cellobiohydrolase I activity by relieving product inhibition JO - Eur J Biochem VL - 253 UR - https://doi.org/10.1046/j.1432-1327.1998.2530101.x DO - 10.1046/j.1432-1327.1998.2530101.x ID - BIgarashi1998 ER - TY - JOUR AU - Walton, J. D. PY - 1996 DA - 1996// TI - Host-selective toxins:agents of compatibility JO - Plant Cell VL - 8 ID - Walton1996 ER - TY - JOUR AU - Sweeney, M. J. AU - Dobson, A. D. W. PY - 1999 DA - 1999// TI - Molecular biology of mycotox in biosynthesis JO - FEMS Micro biology Letters VL - 175 UR - https://doi.org/10.1111/j.1574-6968.1999.tb13614.x DO - 10.1111/j.1574-6968.1999.tb13614.x ID - Sweeney1999 ER - TY - JOUR AU - Panaccione, D. G. AU - Scott-Craig, J. S. AU - Pocard, J. A. AU - Walton, J. D. PY - 1992 DA - 1992// TI - A cyclic peptide synthetase gene required for pathogenicity of the fungus Cochliobolus carbonum on maize JO - Proc Natl Acad SciUSA VL - 89 UR - https://doi.org/10.1073/pnas.89.14.6590 DO - 10.1073/pnas.89.14.6590 ID - Panaccione1992 ER - TY - JOUR AU - Johnson, R. D. AU - Johnson, L. AU - Itoh, Y. AU - Kodama, M. AU - Otani, H. AU - Kohmoto, K. PY - 2000 DA - 2000// TI - Cloning and characterization of a cyclic peptide synthetase gene from Alternaria alternata apple pathotype whose product is involved in AM-toxin synthesis and pathogenicity JO - Mol Plant-Microbe Interact VL - 13 UR - https://doi.org/10.1094/MPMI.2000.13.7.742 DO - 10.1094/MPMI.2000.13.7.742 ID - Johnson2000 ER - TY - JOUR AU - Lee, B. N. AU - Kroken, S. AU - Chou, D. Y. T. AU - Robbertse, B. AU - Yoder, O. C. AU - Turgeon, B. G. PY - 2005 DA - 2005// TI - Functional analysis of all non-ribosomal peptide synthetases in Cochliobolus heterostrophus reveals a factor, NPS6, involved in virulence and resistance to oxidative stress JO - Eukaryot Cell VL - 4 UR - https://doi.org/10.1128/EC.4.3.545-555.2005 DO - 10.1128/EC.4.3.545-555.2005 ID - Lee2005 ER - TY - JOUR AU - Chen, L. H. AU - Lin, C. H. AU - Chung, K. R. PY - 2013 DA - 2013// TI - A nonribosomal peptide synthetase mediates sideroph orepro duction and virulence in the citrus fungal pathogen Alternaria alternate JO - Mol Plant Pathol VL - 14 UR - https://doi.org/10.1111/mpp.12021 DO - 10.1111/mpp.12021 ID - Chen2013 ER - TY - JOUR AU - Li, S. AU - Wang, D. AU - Cao, Y. AU - Zhang, Y. AU - Liu, H. AU - Tongyan, L. PY - 2018 DA - 2018// TI - Transcriptome profile of Amur sturgeon (Acipenser schrenckii) liver provides insights into immune modulation in response to Yersinia ruckeri infection JO - Aquaculture. VL - 492 UR - https://doi.org/10.1016/j.aquaculture.2018.04.014 DO - 10.1016/j.aquaculture.2018.04.014 ID - Li2018 ER - TY - JOUR AU - Kim, D. AU - Langmead, B. AU - Salzberg, S. L. PY - 2015 DA - 2015// TI - HISAT: a fast spliced aligner with low memory requirements JO - Nat Methods VL - 12 UR - https://doi.org/10.1038/nmeth.3317 DO - 10.1038/nmeth.3317 ID - Kim2015 ER - TY - JOUR AU - Trapnell, C. AU - Williams, B. A. AU - Pertea, G. AU - Mortazavi, A. AU - Kwan, G. AU - Baren, M. J. AU - Salzberg, S. L. AU - Wold, B. J. AU - Pachter, L. PY - 2010 DA - 2010// TI - Transcript assembly and quanti cation by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation JO - Nat Biotechnol VL - 28 UR - https://doi.org/10.1038/nbt.1621 DO - 10.1038/nbt.1621 ID - Trapnell2010 ER - TY - JOUR AU - Robinson, M. D. AU - McCarthy, D. J. AU - Smyth, G. K. PY - 2010 DA - 2010// TI - edgeR: a bioconductor package for differential expression analysis of digital gene expression data JO - Bioinformatics. VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp616 DO - 10.1093/bioinformatics/btp616 ID - Robinson2010 ER - TY - JOUR AU - Love, M. I. AU - Huber, W. AU - Anders, S. PY - 2014 DA - 2014// TI - Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 JO - Genome Biol VL - 15 UR - https://doi.org/10.1186/s13059-014-0550-8 DO - 10.1186/s13059-014-0550-8 ID - Love2014 ER - TY - JOUR AU - Young, M. D. AU - Wakefield, M. J. AU - Smyth, G. K. AU - Oshlack, A. PY - 2010 DA - 2010// TI - Gene ontology analysis for RNA-SEQ: accounting for selection bias JO - Genome Biol VL - 11 UR - https://doi.org/10.1186/gb-2010-11-2-r14 DO - 10.1186/gb-2010-11-2-r14 ID - Young2010 ER - TY - JOUR AU - Petersen, T. N. AU - Brunak, S. AU - Heijne, G. AU - Nielsen, H. PY - 2011 DA - 2011// TI - SignalP 4.0: discriminating signal peptides from transmembrane regions JO - Nat Methods VL - 8 UR - https://doi.org/10.1038/nmeth.1701 DO - 10.1038/nmeth.1701 ID - Petersen2011 ER - TY - JOUR AU - Krogh, A. AU - Larsson, B. AU - Heijne, G. AU - Sonnhammer, E. L. L. PY - 2001 DA - 2001// TI - Predicting transmembrane protein topology with a hidden markovmodel: application to complete genomes1 JO - J Mol Biol VL - 305 UR - https://doi.org/10.1006/jmbi.2000.4315 DO - 10.1006/jmbi.2000.4315 ID - Krogh2001 ER - TY - JOUR AU - Medema, M. H. AU - Blin, K. AU - Cimermancic, P. AU - Jager, V. D. AU - Zakrzewski, P. AU - Fischbach, M. A. AU - Weber, T. AU - Takano, E. AU - Breitling, R. PY - 2011 DA - 2011// TI - antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences JO - Nucleic Acids Res VL - 39 UR - https://doi.org/10.1093/nar/gkr466 DO - 10.1093/nar/gkr466 ID - Medema2011 ER - TY - JOUR AU - Winnenburg, R. AU - Baldwin, T. K. AU - Urban, M. AU - Rawlings, C. AU - Koehler, J. AU - Hammond-Kosack, K. E. PY - 2006 DA - 2006// TI - PHI-base: a new database for pathogen host interactions JO - NucleicAcids Res VL - 34 UR - https://doi.org/10.1093/nar/gkj047 DO - 10.1093/nar/gkj047 ID - Winnenburg2006 ER - TY - JOUR AU - Park, B. H. AU - Karpinets, T. V. AU - Syed, M. H. AU - Leuze, M. R. AU - Uberbacher, E. C. PY - 2010 DA - 2010// TI - CAZymes analysis toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database JO - Glycobiology. VL - 20 UR - https://doi.org/10.1093/glycob/cwq106 DO - 10.1093/glycob/cwq106 ID - Park2010 ER - TY - JOUR AU - Yin, Y. AU - Mao, X. AU - Yang, J. AU - Chen, X. AU - Mao, F. AU - Xu, Y. PY - 2012 DA - 2012// TI - dbCAN: a web resource for automated carbohydrate-active enzyme annotation JO - Nucleic Acids Res VL - 40 UR - https://doi.org/10.1093/nar/gks479 DO - 10.1093/nar/gks479 ID - Yin2012 ER - TY - JOUR AU - Langfelder, P. AU - Horvath, S. PY - 2008 DA - 2008// TI - WGCNA: an R package for weighted correlation network analysis JO - BMC Bioinform VL - 9 UR - https://doi.org/10.1186/1471-2105-9-559 DO - 10.1186/1471-2105-9-559 ID - Langfelder2008 ER -