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Table 1 Predicted surface proteins after bacterial surface protein shaving of S. haemolyticus

From: Identification of surface proteins in a clinical Staphylococcus haemolyticus isolate by bacterial surface shaving

Accession# PSM# Unique PeptidesFold change HaCaT vs Controlp-value HaCaT vs ControlLPxTG Cell-wall anchoredPrediction of subcellular localizationPreferred name, EggNOGAnnotation summary
ACAKHAOO_00208871.750.046Extracellular (SPI)ymaCDUF867 type protein
ACAKHAOO_02015721.600.014Extracellular (SPI)sceDPutative transglycosylase SceD
ACAKHAOO_00540433601.560.123LPDTGCell Wall (SPI)pelXSerine-aspartate repeat-containing protein I / YSIRK-type signal peptide-containing protein
ACAKHAOO_0103354251.460.039Extracellular (SPI)atlBifunctional autolysin
ACAKHAOO_00522631.350.054LPNAGCell Wall (SPI)sasHMannosylglucosyl-3-phosphoglycerate phosphatase
ACAKHAOO_00546188381.340.200LPDTGCell Wall (SPI)Serine-aspartate repeat-containing protein I / C protein alpha-antigen
ACAKHAOO_00080651.240.143LPKSGCell Wall (SPI)Serine-aspartate repeat-containing protein D / YSIRK-type signal peptide-containing protein
ACAKHAOO_024691031.240.380Extracellular (SPI)isaAPutative transglycosylase IsaA
ACAKHAOO_00631521.180.213Extracellular (SPI)Hypothetical protein
ACAKHAOO_02587221.060.815Extracellular (SPI)isaBImmunodominant staphylococcal antigen B
ACAKHAOO_00744221.010.916Membrane (SPI)dtpTDi-tripepride ABC transporter
ACAKHAOO_0259885−1.010.997Surfacea(SPII)proXABC transporter substrate-binding protein / Glycine betaine/carnitine transport binding protein GbuC
ACAKHAOO_025938128−1.010.936LPNTGCell Wall (SPI)Cell wall anchor protein / hypothetical protein
ACAKHAOO_0181033−1.020.960Membrane (SPI)yhaNPutative protein YhaN
ACAKHAOO_0122422−1.040.907Membrane (SPI)rsePPutative zinc metalloprotease
ACAKHAOO_0254953−1.050.766Membrane (SPI)brpAPolyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU / transcriptional regulator
ACAKHAOO_0177022−1.060.763Extracellular (SPI)lytDBifunctional autolysin
ACAKHAOO_0145373−1.070.734Extracellular (SPI)lapAExtracellular matrix-binding protein ebh / YSIRK-type signal peptide-containing protein
ACAKHAOO_01492135−1.070.915Surfacea(Possibly sec)ebpSElastin-binding protein EbpS
ACAKHAOO_0154122−1.090.689Membrane (SPI)yqhLPutative protein YibN / sulfurtransferase
ACAKHAOO_0032354−1.090.573Membrane (SPI)ykuTSmall-conductance mechanosensitive channel
ACAKHAOO_0104242−1.100.582Membrane (SPII)cyoAPutative quinol oxidase subunit 2
ACAKHAOO_0216885−1.100.528Membrane (SPI)cusASwarming motility protein SwrC
ACAKHAOO_0107733−1.100.596Extracellular (SPII)recNCell-wall vinding protein / hypothetical protein
ACAKHAOO_0164022−1.110.230Membrane (SPI)secFProtein translocase subunit SecDF
ACAKHAOO_0180895−1.120.545Membrane (SPII)prsAFoldase protein PrsA
ACAKHAOO_0071921−1.140.487Membrane (SPII)corC1UPF0053 protein / HlyC/CorC family transporter
ACAKHAOO_0223631−1.140.633Membrane (SPI)lyrALysostaphin resistance protein A
ACAKHAOO_01582147−1.160.360Membrane (SPI)yqfAUPF0365 protein / hypothetical protein
ACAKHAOO_0146266−1.170.399Membrane (SPI)ponAPenicillin-binding protein
ACAKHAOO_0156133−1.170.634Extracellular (No pathway)sodASuperoxide dismutase [Mn/Fe]
ACAKHAOO_0180653−1.180.235Extracellular (SPI)yhaHHypothetical protein
ACAKHAOO_004642812−1.190.327Membrane (SPI)ftsHATP-dependent zinc metalloprotease FtsH
ACAKHAOO_01734498−1.190.394Surfacea(SpI)ytxGDUF948 domain-containing protein
ACAKHAOO_0219176−1.200.452Membrane (SPII)fhuDFerrichrome ABC transporter substrate-binding protein
ACAKHAOO_0108851−1.200.591Membrane (SPI)DUF4064 hypothetical protein
ACAKHAOO_01722158−1.210.377Membrane (SPI)htrASerine protease Do-like HtrA/HtrB
ACAKHAOO_0206822−1.210.607Membrane (SPI)Hypothetical protein
ACAKHAOO_0140321−1.210.660Surfacea(No pathway)pstBPhosphate import ATP-binding protein PstB 3
ACAKHAOO_0095854−1.220.357Membrane (SPI)spsBSignal peptidase IB
ACAKHAOO_0049422−1.230.243Membrane (SPI)yacLPutative PIN and TRAM-domain containing protein YacL
ACAKHAOO_0202621−1.230.314Membrane (SPI)atpFATP synthase subunit b
ACAKHAOO_01924103−1.240.066Membrane (SPI)Hypothetical protein
ACAKHAOO_0106231−1.250.454Extracellular (No pathway)Hypothetical protein
ACAKHAOO_001824016−1.280.265Membrane (SPII)sitAMetal ABC transporter substrate-binding protein / Manganese-binding lipoprotein MntA
ACAKHAOO_0134785−1.290.151Surfacea(SpI)Hypothetical protein
ACAKHAOO_0071843−1.310.223Membrane (SPI)fruAPTS system fructose-specific EIIABC component
ACAKHAOO_007532510−1.320.226Surfacea(SPII)fatBPutative ABC transporter solute-binding protein YclQ
ACAKHAOO_01747126−1.340.096Surfacea(SpI)Hypothetical protein
ACAKHAOO_0056187−1.340.209Membrane (No pathway)murFCapsule biosynthesis protein CapA
ACAKHAOO_0259787−1.350.204Membrane (SPI)ydfJMembrane protein YdfJ
ACAKHAOO_0173622−1.380.169Surfacea(No pathway)sftADNA translocase FtsK/SftA
ACAKHAOO_0209922−1.380.121Membrane (SPII)fecBIron citrate ABC transporter substrate-binding protein YfmC
ACAKHAOO_0036265−1.390.108Membrane (SPII)penPBeta-lactamase
ACAKHAOO_0097695−1.400.051Extracellular (SPII)oppAOligopeptide ABC transporter / Dipeptide-binding protein DppE
ACAKHAOO_00003257−1.410.500LPMTGCell Wall (SPI) Hypothetical protein
ACAKHAOO_01406177−1.420.107Membrane (SPII)pstSPhosphate-binding protein PstS
ACAKHAOO_02108187−1.430.261Membrane (SPI)Hypothetical protein
ACAKHAOO_0097433−1.470.139Membrane (No pathway)oppDABC transporter / nickel transport system / Oligopeptide transport ATP-binding protein OppD
ACAKHAOO_00701114−1.470.338Surfacea(SpI)Hypothetical protein
ACAKHAOO_002292514−1.490.130Membrane (SPI)pbpCBeta-lactam-inducible penicillin-binding protein
ACAKHAOO_0188521−1.530.146Membrane (SPI)yihYUPF0761 protein
ACAKHAOO_0219752−1.540.038Extracellular (SPI)ssaAStaphylococcal secretory antigen SsaA / CHAP domain-containing protein
ACAKHAOO_0175232−1.670.102LPNTGCell Wall (SPI)Extracellular matrix-binding protein ebh / Signal peptide protein, YSIRK family / DUF1542
ACAKHAOO_0090494−1.740.026Surfacea(SPII)metQMethionine-binding lipoprotein MetQ
  1. Surface proteins were defined as proteins predicted from cytoplasmic membrane, cell wall or extracellular origin. Positive prediction of subcellular localization was determined by a two out of three or greater concurrent results between the databases
  2. aSurface: proteins were predicted as from cytoplasmic membrane, cell wall or extracellular origin, however, concurrent results between two out of three databases were not obtained