Gene region | Nucleotide identity (%)/amino acid identity (%) | Untreated sewage |
|---|
Human | Bovine | Swine | Feline | Canine | Rat |
|---|
Lb | 67.3/61.05 | 44.1/39.26 | 43.1/35.0 | 62.0/46.82 | 60.6/56.39 | 85.4/90.18 | – |
P1b | 75.1/79.76 | 57.7/52.96 | 59.6/55.27 | 74.8/80.58 | 75.5/77.28 | 91.7/99.08 | 84.6/93.29 |
P2b | 77.9/83.11 | 63.2/62.52 | 62.2/59.44 | 77.9/84.75 | 79.7/85.57 | 93.7/98.52 | 87.5/93.93 |
P3b | 80.3/87.0 | 64.9/63.59 | 63.7/64.7 | 80.2/85.54 | 82.3/86.6 | 94.1/98.94 | 87.8/93.10 |
Full sequence | 77.4/81.49 | 58.9/57.2 | 59.5/57.22 | 76.7/81.26 | 77.7/80.67 | 92.8/98.3 | 84.9/93.48 |
- a Reference Kobuvirus strains include: human (accession no. AB040749), bovine (accession no. AB084788.1), canine (accession no. JQ911763.1), rat (accession no. MN116647.1), swine (accession no.EU787450.2), feline (accession no. KJ958930.1), and untreated sewage (accession no. JQ898342.1)
- bL: Kobuvirus genome leader sequence
- (Human kobuvirus:745–1253 nt, Bovine kobuvirus:809–1368 nt, Swine kobuvirus:577–1160 nt, Feline kobuvirus:718–1221 nt, Canine kobuvirus:713–1225 nt, Rat kobuvirus: 737–1228 nt, Sewage kobuvirus:not mentioned)
- P1: structural viral protein, including the VP0, VP1, and VP3 regions
- (Human kobuvirus:1254–3791 nt, Bovine kobuvirus:1369–3939 nt, Swine kobuvirus:1161–3689 nt, Feline kobuvirus:1222–3780 nt, Canine kobuvirus:1226–3874 nt, Rat kobuvirus:1229–3853 nt, Sewage kobuvirus:181–2421 nt)
- P2: nonstructural protein, including regions 2A–2C
- (Human kobuvirus:3792–5699 nt, Bovine kobuvirus:3940–5841 nt, Swine kobuvirus:3690–5687 nt, Feline kobuvirus:3781–5688 nt, Canine kobuvirus:3875–5706 nt, Rat kobuvirus:3854–5686 nt, Sewage kobuvirus:2422–4329 nt)
- P3: nonstructural protein, including regions 3A–3D
- (Human kobuvirus:5700–8043 nt, Bovine kobuvirus:5842–8200 nt, Swine kobuvirus:5688–8043 nt, Feline kobuvirus:5689–8029 nt, Canine kobuvirus:5707–8048 nt, Rat kobuvirus:5687–8030 nt, Sewage kobuvirus:4330–6672 nt)
