Profiling the urinary microbiome in men with calcium-based kidney stones

BMC Microbiology

Table 2 Comparison of average relative abundance of bladder urine microbiome in kidney stone patients and healthy subjects at different taxonomic levels

Taxa		Average abundance (%)			Prevalence (%)
Taxa		P value	HB	KB	HB	KB
Phylum	Bacteroidetes	< 0.001	19.362	6.402	100	100
	Proteobacteria	0.013	36.641	51.797	100	100
	Firmicutes	0.024	36.114	29.318	100	100
Family	Moraxellaceae	< 0.001	11.960	32.655	100	100
	Prevotellaceae	0.001	8.992	1.572	100	73
	Odoribacteraceae	0.008	0.110	0.000	29	0
	Fusobacteriaceae	0.012	0.374	1.303	43	73
	Porphyromonadaceae	0.014	0.754	0.341	67	27
	Enterococcaceae	0.041	0.494	0.913	57	73
	Planococcaceae	0.047	0.132	0.487	38	59
Genus	Acinetobacter	< 0.001	10.996	31.383	100	100
	Prevotella	0.001	9.377	1.628	100	73
	Desulfovibrio	0.008	0.178	0.000	29	0
	Eubacterium	0.008	0.039	0.000	29	0
	Odoribacter	0.008	0.083	0.000	29	0
	Fusobacterium	0.012	0.374	1.297	43	73
	Parabacteroides	0.017	0.540	0.252	57	23
	Lysinibacillus	0.020	0.069	0.468	29	55
	Oscillospira	0.039	0.626	0.019	38	14
Species	Acinetobacter johnsonii	< 0.001	7.310	26.039	100	100
	Prevotella copri	< 0.001	7.272	0.431	86	59
	Prevotella stercorea	0.002	0.422	0.031	57	14
	Clostridium sartagoforme	0.004	0.099	0.000	33	0
	Bacteroides barnesiae	0.008	0.369	0.000	29	0
	Eubacterium biforme	0.008	0.031	0.000	29	0
	Lysinibacillus boronitolerans	0.020	0.069	0.468	29	55
	Bacteroides ovatus	0.021	1.084	0.212	57	23
	Parabacteroides distasonis	0.030	0.337	0.047	43	14
	Bacteroides fragilis	0.033	0.368	0.070	43	14
	Bacteroides plebeius	0.037	1.473	1.876	71	91
	Veillonella parvula	0.047	0.364	0.213	38	9

ISSN: 1471-2180