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Table 1 Primers and probes for the duplex real-time PCR assay

From: Prevalence and antibiotic susceptibility patterns of enteric bacterial pathogens in human and non-human sources in an urban informal settlement in Cape Town, South Africa

Primer/probe

5́ Dye

Sequence

3́ Dye

Reference

stx1a-primer

 

CAAGAGCGATGTTACGGT

 

[18]

stx1b-primer

AATTCTTCCTACACGAACAGA

[17]

stx1f-probe

CTGGGGAAGGTTGAGTAGCG

Fluorescein

[17]

stx1r-probe

CALFluor 610

CCTGCCTGACTATCATGGACA

3′ phosphor

[17]

stx2a-primer

 

GGGACCACATCGGTGT

[17]

stx2b-primer

CGGGCACTGATATATGTGTAA

[17]

stx2f-probe

CTGTGGATATACGAGGGCTTGATGTC

Fluorescein

[17]

stx2r-probe

CAL Fluor 610

ATCAGGCGCGTTTTGACCATCT

3′ phosphor

[17]