BMC Microbiology

Table 4 Polymorphisms and features of housekeeping genes of Helicobacter pylori strains obtained from paediatric patients

From: Inference from the analysis of genetic structure of Helicobacter pylori strains isolates from two paediatric patients with recurrent infection

	Gene	First event					Second event
	Gene	Polymorphic Sites	Haplotype	Hd	Π	Θ	Polymorphic Sites	Haplotype	Hd	Π	Θ
Patient one	atpA	23	2	0.100	0.0036	0.0104	0	1	0	0	0
	efp	17	3	0.279	0.0087	0.0116	0	1	0	0	0
	mutY	32	3	0.195	0.0084	0.0214	0	1	0	0	0
	ppa	10	2	0.189	0.0047	0.0070	20	3	0.353	0.00960	0.01416
	trpC	45	4	0.284	0.0124	0.0290	0	1	0	0	0
	ureI	31	4	0.284	0.0081	0.0159	14	2	0.100	0.00239	0.00675
	yphC	0	1	0.000	0	0	0	1	0	0	0
	Concatenated	158	8	0.647	0.00640	0.0134	34	4	0.432	0.00153	0.00281
Patient two	atpA	17	3	0.195	0.00357	0.0076	23	2	0.100	0.00367	0.1034
	efp	9	2	0.100	0.00220	0.0061	9	2	0.100	0.00220	0.00619
	mutY	37	3	0.195	0.01051	0.0248	0	1	0	0	0
	ppa	18	2	0.100	0.00452	0.0127	0	1	0	0	0
	trpC	50	3	0.195	0.01412	0.0315	0	1	0	0	0
	ureI	18	2	0.100	0.00308	0.0086	18	2	0.100	0.00308	0.00867
	yphC	19	3	0.353	0.00406	0.1050	21	2	0.100	0.00412	0.01161
	Concatenated	168	5	0.505	0.00577	0.0139	71	3	0.195	0.00208	0.00588

Π: Nucleotide diversity per site; Θ: Average number of nucleotide differences per site

Back to article page

ISSN: 1471-2180

Contact us

General enquiries: journalsubmissions@springernature.com