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Table 1 Spoligotyping versus Ag85C (G-A) SNP for LAM detection

From: Exploring the “Latin American Mediterranean” family and the RDRio lineage in Mycobacterium tuberculosis isolates from Paraguay, Argentina and Venezuela

  Spoligotyping
  aAG85C LAM Not LAM New, orphan, unknown
PARAGUAY SNP 105 9 19
No SNP 4 97 14
Mixed 2 7 1
ARGENTINA SNP 22 13 1
No SNP 0 18 0
Mixed 0 1 0
VENEZUELA SNP 63 0 7
No SNP 0 23 4
Mixed 0 2 1
  1. aNumber of isolates with presence or absence of the Ag85C103 SNP. Mixed = two amplification products indicating presence and absence of the SNP. In this table strains that lacked result for spoligotyping or the SNP were excluded