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Table 1 Strains, plasmids and primers used in this study

From: Biological and transcriptomic studies reveal hfq is required for swimming, biofilm formation and stress response in Xanthomonas axonpodis pv. citri

Strains, plasmids and primers

Feature

Source

Strains

Xac29–1

G, wt

Ye et al. (2013)

Xac29–1Δhfq

G, Δhfq

This study

Xac 9-1Δhfq-C

G, hfq+

This study

 JM109

G

Takara

Plasmids

 pEASY-T1

Kan+/Amp+

TransGen

 pK18mobSacB

Kan+, SacB

Zou et al. (2011)

 pK18mobSacBhfq

Kan+, SacB, hfq+

This study

 pBBR1MCS-5

Gm+

Zou et al. (2011)

Primers

hfq-F

5′-GCTTCAGGCGTGTAACATCC-3’

This study

hfq-R

5′-GCGAACTCCTCCAACACATC-3’

This study

hfq-up-F

5′-TGGGATCCCGCGTGTTGAAGGTGGTATT-3’

This study

hfq-up-R

5′-TGGGTACCCGAAAAATCCTCTTCATTATTGT-3’

This study

hfq-down-F

5′-TGGGTACCCGGAGTAGTGCGTGTTTGATC-3’

This study

hfq-down-R

5′-GCTCTAGAAAGCCTCTGCACCGGTCAACA-3’

This study

hfq-F1

ATGGCTAAGGGGCAATCTTTAC

This study

hfq-R1

ACCGATCAAACACGCACTACT

This study