Table 3 Systems included Phages, prophages, transposable elements, plasmids category
From: Genomic analysis of methicillin-resistant Staphylococcus aureus strain SO-1977 from Sudan
Category | Subcategory | Subsystem | Role |
|---|---|---|---|
Phages, Prophages, Transposable elements, Plasmids | Phages, Prophages | Phage tail proteins | Phage tail protein/ Phage tail length tape-measure protein |
Phage replication | Single stranded DNA-binding protein/ Phage replication initiation protein/ DNA polymerase III alpha subunit/ DNA helicase, phage-associated | ||
Phage packaging machinery | Phage DNA packaging/ Phage terminase, small subunit/ Phage terminase, large subunit/ Phage portal protein | ||
Phage capsid proteins | Phage capsid and scaffold/ Phage head maturation protease/ Phage major capsid protein/ Phage capsid protein | ||
Phage lysis modules | Phage lysin, N-acetylmuramoyl-L-alanine amidase/ Phage holin | ||
Pathogenicity islands | Listeria Pathogenicity Island LIPI-1 extended | Phosphatidylinositol-specific phospholipase | |
Zinc metalloproteinase precursor |