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Table 1 Taxonomic profile of cecal and colonic samples of CON- and TGS-fed pigs at domain level

From: Functional adaptations in the cecal and colonic metagenomes associated with the consumption of transglycosylated starch in a pig model

Domain Meana log2 fold change SEb p value q value‡
Cecum
 Archaea 24,714 −0.018 0.067 0.789 0.930
 Bacteria 2,897,040 0.729 0.206 < 0.001 0.003
Colon
 Archaea 34,107 −0.128 0.076 0.091 0.135
 Bacteria 2,917,299 0.533 0.125 < 0.001 < 0.001
  1. ‡False discovery rate (Benjamini-Hochberg) corrected p value
  2. aNormalized reads (hit counts). Only the most abundant genera (> 0.01% of all reads) that were altered by the dietary starch source are presented (n = 8 per diet and gut site)
  3. bStandard error of the log2fold change
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BMC Microbiology

ISSN: 1471-2180

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