Sample | Histological diagnosis | Specific PCR [13] | Panfungal PCRs [13] | NGS > 1st SD | NGS > 2nd SD | NGS > 3rd SD | NGS > 4th SD |
---|---|---|---|---|---|---|---|
1 | Chromoblastomycosis | Not performed | Contaminated | Matchd | No match | No match | No match |
2 | Mucormycosis | Negative | Contaminated | No match | No match | No match | No match |
3 | Histoplasmosis | Negative | Contaminated | Mismatche | Mismatchf | No match | No match |
4 | Mucormycosis | Positivea | Contaminated | No match | No match | No match | Matchg |
5 | Histoplasmosis or cryptococcosis | Negative | Contaminated | No match | No match | No match | Matchh |
6 | Chromoblastomycosis | Not performed | Contaminated | Mismatchi | Matchj | No match | No match |
7 | Rhinosporidiosis | Not performed | Contaminated | No match | No match | No match | No match |
8 | Mycetoma | Not performed | Contaminated | Mismatchk | Mismatchl | No match | Matchm |
9 | Rhinosporidiosis | Not performed | Contaminated | Mismatchn | No match | No match | No match |
10 | Mycetoma | Not performed | Contaminated | Mismatcho | No match | No match | No match |
11 | Histoplasmosis | Negative | Contaminated | No match | No match | No match | No match |
12 | Histoplasmosis | Negative | Contaminated | Mismatchp | Mismatchq | Mismatchr | No match |
13 | Chromoblastomycosis | Not performed | Contaminated | No match | No match | No match | No match |
14 | Histoplasmosis | Positive | Partially positiveb | No match | No match | No match | Matchs |
15 | Coccidioidomycosis | Not performed | Contaminated | Mismatcht | No match | No match | No match |
16 | Coccidioidomycosis | Not performed | Contaminated | No match | No match | No match | No match |
17 | Mycetoma | Not performed | Partially positivec | No match | No match | No match | Matchu |