Advertisement
Table 2 Detectable fungal species and their relative proportion of reads in the samples
| Species | Mean percentage of reads in the sample (± 1 standard deviation) | Mean percentage of fungal reads in the sample (± 1 standard deviation) |
|---|---|---|
| Aspergillus spp. | 0.001967% ± 0.001822% | 2.2087% ± 1.6228% |
| Acremonium chrysogenum | 0.000002% ± 0.000005% | 0.0081% ± 0.0260% |
| Bipolaris oryzae | 0.000110% ± 0.000218% | 0.1420% ± 0.2276% |
| Bipolaris sorokiniana | 0.000090% ± 0.000210% | 0.0891% ± 0.1922% |
| Bipolaris zeicola | 0.000085% ± 0.000187% | 0.1272% ± 0.2026% |
| Capronia coronata | 0.000046% ± 0.000063% | 0.0586% ± 0.0775% |
| Capronia epimyces | 0.000177% ± 0.000162% | 0.2813% ± 0.3244% |
| Chaetomium globosum | 0.000197% ± 0.000137% | 0.2739% ± 0.2444% |
| Chaetomium thermophilum var. Thermophilum | 0.000092% ± 0.000112% | 0.1204% ± 0.1443% |
| Cladophialophora carrionii | 0.000058% ± 0.000068% | 0.1014% ± 0.1472% |
| Cladophialophora psammophila | 0.000060% ± 0.000064% | 0.0989% ± 0.1323% |
| Cladophialophora yegresii | 0.001570% ± 0.001623% | 1.2943% ± 1.1669% |
| Cladosporium cladosporioides | 0.000017% ± 0.000045% | 0.0422% ± 0.0986% |
| Coccidioides immitis | 0.000093% ± 0.000109% | 0.1463% ± 0.2174% |
| Coccidioides posadasii | 0.000094% ± 0.000133% | 0.1209% ± 0.1931% |
| Cryptococcus carnescens | 0.000000% ± 0.000002% | 0.0004% ± 0.0021% |
| Cryptococcus gattii | 0.000021% ± 0.000043% | 0.0221% ± 0.0480% |
| Cryptococcus neoformans | 0.000041% ± 0.000061% | 0.0559% ± 0.0865% |
| Cryptococcus stepposus | 0.000001% ± 0.000006% | 0.0026% ± 0.0125% |
| Cryptococcus tronadorensis | 0.000001% ± 0.000004% | 0.0009% ± 0.0042% |
| Cryptococcus victoriae | 0.000004% ± 0.000021% | 0.0043% ± 0.0209% |
| Cyphellophora europaea | 0.000076% ± 0.000111% | 0.1233% ± 0.1819% |
| Exophiala dermatitidis | 0.000033% ± 0.000057% | 0.0422% ± 0.0670% |
| Exophiala pisciphila | 0.000001% ± 0.000002% | 0.0017% ± 0.0064% |
| Fusarium graminearum | 0.000035% ± 0.000047% | 0.0440% ± 0.0743% |
| Fusarium pseudograminearum | 0.000978% ± 0.004153% | 0.8826% ± 3.3271% |
| Fusarium solani | 0.000001% ± 0.000005% | 0.0022% ± 0.0074% |
| Histoplasma capsulatum | 0.001019% ± 0.004143% | 1.6474% ± 7.0562% |
| Leptosphaeria maculans | 0.000243% ± 0.000419% | 0.3583% ± 0.4897% |
| Madurella mycetomatis | 0.000045% ± 0.000208% | 0.1752% ± 0.8338% |
| Mortierella verticillata | 0.000001% ± 0.000004% | 0.0013% ± 0.0063% |
| Paracoccidioides brasiliensis | 0.000156% ± 0.000189% | 0.1896% ± 0.2083% |
| Paracoccidioides sp. ‘lutzii’ | 0.000132% ± 0.000156% | 0.2044% ± 0.2638% |
| Pythium ultimum | 0.000871% ± 0.004170% | not classified as a fungus |
| Rhizopus oryzae | 0.000002% ± 0.000008% | 0.0022% ± 0.0104% |
| Setosphaeria turcica | 0.000240% ± 0.000425% | 0.3191% ± 0.4822% |
| Sporothrix schenckii | 0.000005% ± 0.000021% | 0.0096% ± 0.0417% |
